Experiment: no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0480c and Rv0481c are separated by 181 nucleotides Rv0481c and Rv0482 are separated by 26 nucleotides Rv0482 and Rv0483 are separated by 61 nucleotides
Rv0480c: Rv0480c - Possible amidohydrolase, at 568,964 to 569,806
Rv0480c
Rv0481c: Rv0481c - Hypothetical protein, at 569,988 to 570,512
Rv0481c
Rv0482: Rv0482 - Probable UDP-N-acetylenolpyruvoylglucosamine reductase MurB (UDP-N-acetylmuramate dehydrogenase), at 570,539 to 571,648
Rv0482
Rv0483: Rv0483 - Probable conserved lipoprotein LprQ, at 571,710 to 573,065
Rv0483
Position (kb) 570
571
572 Strain fitness (log2 ratio) -1
0
1
2 at 569.737 kb on - strand at 569.774 kb on - strand at 570.039 kb on + strand at 570.048 kb on + strand, within Rv0481c at 570.048 kb on + strand, within Rv0481c at 570.049 kb on - strand, within Rv0481c at 570.049 kb on - strand, within Rv0481c at 570.096 kb on - strand, within Rv0481c at 570.096 kb on - strand, within Rv0481c at 570.372 kb on + strand, within Rv0481c at 570.372 kb on + strand, within Rv0481c at 570.373 kb on - strand, within Rv0481c at 570.378 kb on + strand, within Rv0481c at 570.433 kb on + strand, within Rv0481c at 570.433 kb on + strand, within Rv0481c at 570.445 kb on + strand, within Rv0481c at 570.445 kb on + strand, within Rv0481c at 570.446 kb on - strand, within Rv0481c at 570.481 kb on + strand at 570.482 kb on - strand at 570.512 kb on + strand at 571.647 kb on - strand at 571.757 kb on + strand at 571.758 kb on - strand at 572.037 kb on + strand, within Rv0483 at 572.037 kb on + strand, within Rv0483 at 572.038 kb on - strand, within Rv0483 at 572.038 kb on - strand, within Rv0483 at 572.038 kb on - strand, within Rv0483 at 572.038 kb on - strand, within Rv0483 at 572.059 kb on - strand, within Rv0483 at 572.059 kb on - strand, within Rv0483 at 572.059 kb on - strand, within Rv0483 at 572.094 kb on + strand, within Rv0483 at 572.094 kb on + strand, within Rv0483 at 572.094 kb on + strand, within Rv0483 at 572.094 kb on + strand, within Rv0483 at 572.095 kb on - strand, within Rv0483 at 572.290 kb on + strand, within Rv0483 at 572.291 kb on - strand, within Rv0483 at 572.382 kb on + strand, within Rv0483 at 572.386 kb on - strand, within Rv0483 at 572.424 kb on + strand, within Rv0483 at 572.424 kb on + strand, within Rv0483 at 572.425 kb on - strand, within Rv0483 at 572.425 kb on - strand, within Rv0483 at 572.451 kb on + strand, within Rv0483 at 572.465 kb on + strand, within Rv0483 at 572.465 kb on + strand, within Rv0483 at 572.466 kb on - strand, within Rv0483 at 572.466 kb on - strand, within Rv0483 at 572.466 kb on - strand, within Rv0483 at 572.577 kb on + strand, within Rv0483
Per-strain Table
Position Strand Gene LocusTag Fraction no stress control remove 569,737 - +0.3 569,774 - -1.3 570,039 + -0.4 570,048 + Rv0481c 0.11 +0.7 570,048 + Rv0481c 0.11 +0.6 570,049 - Rv0481c 0.12 +0.4 570,049 - Rv0481c 0.12 -1.0 570,096 - Rv0481c 0.21 -0.6 570,096 - Rv0481c 0.21 -0.5 570,372 + Rv0481c 0.73 +1.8 570,372 + Rv0481c 0.73 -0.4 570,373 - Rv0481c 0.73 +0.2 570,378 + Rv0481c 0.74 -0.9 570,433 + Rv0481c 0.85 -0.4 570,433 + Rv0481c 0.85 -0.2 570,445 + Rv0481c 0.87 -0.1 570,445 + Rv0481c 0.87 -0.2 570,446 - Rv0481c 0.87 -0.4 570,481 + +0.2 570,482 - +1.8 570,512 + -0.7 571,647 - -0.2 571,757 + +0.0 571,758 - -0.3 572,037 + Rv0483 0.24 +1.1 572,037 + Rv0483 0.24 -0.4 572,038 - Rv0483 0.24 -0.3 572,038 - Rv0483 0.24 +0.1 572,038 - Rv0483 0.24 +0.5 572,038 - Rv0483 0.24 -0.2 572,059 - Rv0483 0.26 -1.3 572,059 - Rv0483 0.26 +2.2 572,059 - Rv0483 0.26 +0.4 572,094 + Rv0483 0.28 +0.4 572,094 + Rv0483 0.28 +1.1 572,094 + Rv0483 0.28 +0.6 572,094 + Rv0483 0.28 +0.6 572,095 - Rv0483 0.28 +0.4 572,290 + Rv0483 0.43 +1.2 572,291 - Rv0483 0.43 +0.3 572,382 + Rv0483 0.50 -0.3 572,386 - Rv0483 0.50 -0.4 572,424 + Rv0483 0.53 +1.1 572,424 + Rv0483 0.53 +0.6 572,425 - Rv0483 0.53 +1.4 572,425 - Rv0483 0.53 +0.2 572,451 + Rv0483 0.55 +0.2 572,465 + Rv0483 0.56 +0.2 572,465 + Rv0483 0.56 +0.3 572,466 - Rv0483 0.56 +0.3 572,466 - Rv0483 0.56 -1.1 572,466 - Rv0483 0.56 +1.3 572,577 + Rv0483 0.64 +0.2
Or see this region's nucleotide sequence