Experiment: Lactate-Sulfate (60-30 mM) minimal (MoLS4)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2760 and DVU2761 are separated by 123 nucleotides DVU2761 and DVU2762 are separated by 64 nucleotides
DVU2760: DVU2760 - hypothetical protein (TIGR), at 2,868,372 to 2,868,983
DVU2760
DVU2761: DVU2761 - hypothetical protein (TIGR), at 2,869,107 to 2,869,292
DVU2761
DVU2762: DVU2762 - membrane protein, putative (TIGR), at 2,869,357 to 2,870,277
DVU2762
Position (kb)
2869
2870 Strain fitness (log2 ratio)
-1
0
1
2 at 2868.141 kb on + strand at 2868.165 kb on + strand at 2868.170 kb on + strand at 2868.182 kb on + strand at 2868.188 kb on + strand at 2868.189 kb on + strand at 2868.232 kb on - strand at 2868.343 kb on + strand at 2868.358 kb on - strand at 2868.360 kb on + strand at 2868.364 kb on + strand at 2868.539 kb on + strand, within DVU2760 at 2868.577 kb on + strand, within DVU2760 at 2868.577 kb on + strand, within DVU2760 at 2868.669 kb on - strand, within DVU2760 at 2868.679 kb on - strand, within DVU2760 at 2868.835 kb on - strand, within DVU2760 at 2868.923 kb on + strand at 2868.946 kb on - strand at 2868.968 kb on + strand at 2869.007 kb on + strand at 2869.015 kb on - strand at 2869.015 kb on - strand at 2869.015 kb on - strand at 2869.015 kb on - strand at 2869.059 kb on + strand at 2869.064 kb on + strand at 2869.072 kb on - strand at 2869.113 kb on - strand at 2869.115 kb on - strand at 2869.236 kb on - strand, within DVU2761 at 2869.329 kb on + strand at 2869.384 kb on - strand at 2869.400 kb on + strand at 2869.400 kb on + strand at 2869.408 kb on - strand at 2869.408 kb on - strand at 2869.410 kb on + strand at 2869.418 kb on - strand at 2869.513 kb on - strand, within DVU2762 at 2869.582 kb on + strand, within DVU2762 at 2869.612 kb on - strand, within DVU2762 at 2869.686 kb on + strand, within DVU2762 at 2869.715 kb on + strand, within DVU2762 at 2869.715 kb on + strand, within DVU2762 at 2869.750 kb on - strand, within DVU2762 at 2869.774 kb on + strand, within DVU2762 at 2869.774 kb on + strand, within DVU2762 at 2869.774 kb on + strand, within DVU2762 at 2869.777 kb on - strand, within DVU2762 at 2869.794 kb on - strand, within DVU2762 at 2869.804 kb on + strand, within DVU2762 at 2869.843 kb on - strand, within DVU2762 at 2869.888 kb on + strand, within DVU2762 at 2869.945 kb on - strand, within DVU2762 at 2869.947 kb on + strand, within DVU2762 at 2870.086 kb on - strand, within DVU2762 at 2870.112 kb on + strand, within DVU2762 at 2870.120 kb on - strand, within DVU2762 at 2870.152 kb on + strand, within DVU2762
Per-strain Table
Position Strand Gene LocusTag Fraction Lactate-Sulfate (60-30 mM) minimal (MoLS4) remove 2,868,141 + -1.0 2,868,165 + -0.1 2,868,170 + +0.0 2,868,182 + -0.6 2,868,188 + -1.3 2,868,189 + -0.0 2,868,232 - -0.1 2,868,343 + +0.8 2,868,358 - -0.2 2,868,360 + +0.0 2,868,364 + -0.0 2,868,539 + DVU2760 0.27 -1.4 2,868,577 + DVU2760 0.33 -0.1 2,868,577 + DVU2760 0.33 +0.9 2,868,669 - DVU2760 0.49 -0.1 2,868,679 - DVU2760 0.50 -0.1 2,868,835 - DVU2760 0.76 -0.4 2,868,923 + +1.8 2,868,946 - -0.2 2,868,968 + -0.3 2,869,007 + -0.7 2,869,015 - -0.5 2,869,015 - -1.1 2,869,015 - -1.5 2,869,015 - -0.0 2,869,059 + -0.3 2,869,064 + -0.1 2,869,072 - -0.2 2,869,113 - -1.2 2,869,115 - +0.1 2,869,236 - DVU2761 0.69 -1.3 2,869,329 + -0.7 2,869,384 - +0.6 2,869,400 + +0.1 2,869,400 + +0.0 2,869,408 - -0.8 2,869,408 - +0.2 2,869,410 + +0.5 2,869,418 - -1.4 2,869,513 - DVU2762 0.17 -0.2 2,869,582 + DVU2762 0.24 +0.4 2,869,612 - DVU2762 0.28 -0.1 2,869,686 + DVU2762 0.36 +0.6 2,869,715 + DVU2762 0.39 -0.5 2,869,715 + DVU2762 0.39 -0.1 2,869,750 - DVU2762 0.43 -0.2 2,869,774 + DVU2762 0.45 -0.2 2,869,774 + DVU2762 0.45 -0.8 2,869,774 + DVU2762 0.45 -0.3 2,869,777 - DVU2762 0.46 -0.7 2,869,794 - DVU2762 0.47 +1.0 2,869,804 + DVU2762 0.49 -0.0 2,869,843 - DVU2762 0.53 -0.3 2,869,888 + DVU2762 0.58 -0.4 2,869,945 - DVU2762 0.64 -1.1 2,869,947 + DVU2762 0.64 -1.0 2,870,086 - DVU2762 0.79 -0.4 2,870,112 + DVU2762 0.82 -0.6 2,870,120 - DVU2762 0.83 -0.7 2,870,152 + DVU2762 0.86 -0.9
Or see this region's nucleotide sequence