Experiment: Lactate-Sulfate (60-30 mM) minimal (MoLS4)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0718 and DVU0719 overlap by 4 nucleotides DVU0719 and DVU0720 overlap by 38 nucleotides DVU0720 and DVU0721 are separated by 139 nucleotides
DVU0718: DVU0718 - ISDvu2, transposase OrfA (TIGR), at 798,061 to 798,459
DVU0718
DVU0719: DVU0719 - ISDvu2, transposase OrfB (TIGR), at 798,456 to 799,298
DVU0719
DVU0720: DVU0720 - HAMP domain protein (TIGR), at 799,261 to 800,550
DVU0720
DVU0721: DVU0721 - sensory box histidine kinase (TIGR), at 800,690 to 803,455
DVU0721
Position (kb) 799
800
801 Strain fitness (log2 ratio) -2
-1
0
1 at 799.370 kb on - strand at 799.392 kb on + strand, within DVU0720 at 799.520 kb on - strand, within DVU0720 at 799.615 kb on + strand, within DVU0720 at 799.674 kb on + strand, within DVU0720 at 799.717 kb on + strand, within DVU0720 at 799.741 kb on + strand, within DVU0720 at 799.815 kb on + strand, within DVU0720 at 799.840 kb on + strand, within DVU0720 at 800.025 kb on + strand, within DVU0720 at 800.025 kb on + strand, within DVU0720 at 800.126 kb on + strand, within DVU0720 at 800.126 kb on + strand, within DVU0720 at 800.126 kb on + strand, within DVU0720 at 800.126 kb on + strand, within DVU0720 at 800.134 kb on - strand, within DVU0720 at 800.152 kb on + strand, within DVU0720 at 800.180 kb on + strand, within DVU0720 at 800.285 kb on - strand, within DVU0720 at 800.285 kb on - strand, within DVU0720 at 800.290 kb on - strand, within DVU0720 at 800.481 kb on + strand at 800.586 kb on + strand at 800.737 kb on + strand at 800.767 kb on - strand at 800.801 kb on - strand at 800.803 kb on + strand at 800.803 kb on + strand at 800.808 kb on + strand at 800.836 kb on - strand at 800.838 kb on + strand at 800.916 kb on + strand at 800.932 kb on + strand at 801.039 kb on + strand, within DVU0721 at 801.049 kb on + strand, within DVU0721 at 801.106 kb on + strand, within DVU0721 at 801.213 kb on + strand, within DVU0721 at 801.239 kb on - strand, within DVU0721 at 801.330 kb on + strand, within DVU0721 at 801.338 kb on - strand, within DVU0721 at 801.433 kb on - strand, within DVU0721 at 801.518 kb on + strand, within DVU0721 at 801.527 kb on + strand, within DVU0721
Per-strain Table
Position Strand Gene LocusTag Fraction Lactate-Sulfate (60-30 mM) minimal (MoLS4) remove 799,370 - -0.2 799,392 + DVU0720 0.10 -1.0 799,520 - DVU0720 0.20 -0.0 799,615 + DVU0720 0.27 -1.1 799,674 + DVU0720 0.32 -0.0 799,717 + DVU0720 0.35 -0.4 799,741 + DVU0720 0.37 -0.1 799,815 + DVU0720 0.43 -0.9 799,840 + DVU0720 0.45 -1.4 800,025 + DVU0720 0.59 -0.2 800,025 + DVU0720 0.59 -0.5 800,126 + DVU0720 0.67 -0.4 800,126 + DVU0720 0.67 -1.3 800,126 + DVU0720 0.67 -0.0 800,126 + DVU0720 0.67 +0.1 800,134 - DVU0720 0.68 -0.5 800,152 + DVU0720 0.69 -0.6 800,180 + DVU0720 0.71 -0.3 800,285 - DVU0720 0.79 -0.3 800,285 - DVU0720 0.79 -1.1 800,290 - DVU0720 0.80 +0.3 800,481 + +0.9 800,586 + -1.0 800,737 + -0.2 800,767 - -0.0 800,801 - +0.1 800,803 + -0.1 800,803 + -0.1 800,808 + -0.5 800,836 - +0.8 800,838 + -0.1 800,916 + +0.3 800,932 + +0.7 801,039 + DVU0721 0.13 +0.2 801,049 + DVU0721 0.13 -0.7 801,106 + DVU0721 0.15 +0.2 801,213 + DVU0721 0.19 +0.1 801,239 - DVU0721 0.20 -0.7 801,330 + DVU0721 0.23 +0.4 801,338 - DVU0721 0.23 +0.5 801,433 - DVU0721 0.27 +0.1 801,518 + DVU0721 0.30 -0.3 801,527 + DVU0721 0.30 -2.0
Or see this region's nucleotide sequence