Experiment: growth in full media bubbled with air enriched in 1% CO2 but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06785 and SGL_RS06790 are separated by 52 nucleotides SGL_RS06790 and SGL_RS06795 are separated by 82 nucleotides SGL_RS06795 and SGL_RS06800 are separated by 80 nucleotides
SGL_RS06785: SGL_RS06785 - alpha/beta hydrolase, at 1,049,517 to 1,050,407
_RS06785
SGL_RS06790: SGL_RS06790 - hypothetical protein, at 1,050,460 to 1,050,729
_RS06790
SGL_RS06795: SGL_RS06795 - glutaredoxin 3, at 1,050,812 to 1,051,078
_RS06795
SGL_RS06800: SGL_RS06800 - glutathione synthase, at 1,051,159 to 1,052,121
_RS06800
Position (kb)
1050
1051
1052 Strain fitness (log2 ratio)
-1
0
1 at 1049.841 kb on + strand, within SGL_RS06785 at 1049.864 kb on + strand, within SGL_RS06785 at 1049.872 kb on - strand, within SGL_RS06785 at 1049.945 kb on + strand, within SGL_RS06785 at 1050.011 kb on - strand, within SGL_RS06785 at 1050.252 kb on + strand, within SGL_RS06785 at 1050.263 kb on + strand, within SGL_RS06785 at 1050.302 kb on + strand, within SGL_RS06785 at 1050.389 kb on + strand at 1050.390 kb on + strand at 1050.397 kb on - strand at 1050.397 kb on - strand at 1050.398 kb on - strand at 1050.409 kb on + strand at 1050.409 kb on - strand at 1050.645 kb on + strand, within SGL_RS06790 at 1050.733 kb on - strand at 1051.037 kb on - strand, within SGL_RS06795 at 1051.082 kb on + strand at 1051.146 kb on + strand at 1051.217 kb on - strand at 1051.310 kb on - strand, within SGL_RS06800 at 1051.374 kb on + strand, within SGL_RS06800 at 1051.389 kb on + strand, within SGL_RS06800 at 1051.389 kb on + strand, within SGL_RS06800 at 1051.408 kb on + strand, within SGL_RS06800 at 1051.437 kb on - strand, within SGL_RS06800 at 1051.542 kb on - strand, within SGL_RS06800 at 1051.641 kb on + strand, within SGL_RS06800 at 1051.737 kb on + strand, within SGL_RS06800 at 1052.064 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media bubbled with air enriched in 1% CO2 but diluted to prevent light attenuation remove 1,049,841 + SGL_RS06785 0.36 +1.0 1,049,864 + SGL_RS06785 0.39 +0.5 1,049,872 - SGL_RS06785 0.40 -0.2 1,049,945 + SGL_RS06785 0.48 +1.1 1,050,011 - SGL_RS06785 0.55 +0.1 1,050,252 + SGL_RS06785 0.82 -0.8 1,050,263 + SGL_RS06785 0.84 +0.3 1,050,302 + SGL_RS06785 0.88 +0.5 1,050,389 + -0.5 1,050,390 + -0.4 1,050,397 - -0.4 1,050,397 - +0.1 1,050,398 - -0.1 1,050,409 + -0.1 1,050,409 - -0.2 1,050,645 + SGL_RS06790 0.69 +0.2 1,050,733 - -0.4 1,051,037 - SGL_RS06795 0.84 +0.9 1,051,082 + -0.3 1,051,146 + +0.0 1,051,217 - -0.3 1,051,310 - SGL_RS06800 0.16 -0.4 1,051,374 + SGL_RS06800 0.22 -0.7 1,051,389 + SGL_RS06800 0.24 -0.6 1,051,389 + SGL_RS06800 0.24 -1.3 1,051,408 + SGL_RS06800 0.26 -1.2 1,051,437 - SGL_RS06800 0.29 -0.7 1,051,542 - SGL_RS06800 0.40 -0.5 1,051,641 + SGL_RS06800 0.50 -0.7 1,051,737 + SGL_RS06800 0.60 -0.8 1,052,064 + -0.6
Or see this region's nucleotide sequence