Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS01095

Experiment: growth in full media bubbled with air enriched in 1% CO2 but diluted to prevent light attenuation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS01090 and SGL_RS01095 are separated by 106 nucleotidesSGL_RS01095 and SGL_RS01100 are separated by 234 nucleotides SGL_RS01090: SGL_RS01090 - hypothetical protein, at 95,369 to 96,241 _RS01090 SGL_RS01095: SGL_RS01095 - hypothetical protein, at 96,348 to 96,938 _RS01095 SGL_RS01100: SGL_RS01100 - hypothetical protein, at 97,173 to 98,522 _RS01100 Position (kb) 96 97Strain fitness (log2 ratio) -1 0 1at 95.505 kb on + strand, within SGL_RS01090at 95.505 kb on + strand, within SGL_RS01090at 95.654 kb on - strand, within SGL_RS01090at 96.047 kb on + strand, within SGL_RS01090at 96.053 kb on - strand, within SGL_RS01090at 96.095 kb on + strand, within SGL_RS01090at 96.830 kb on - strand, within SGL_RS01095at 97.128 kb on + strandat 97.224 kb on + strandat 97.380 kb on - strand, within SGL_RS01100at 97.406 kb on - strand, within SGL_RS01100at 97.451 kb on + strand, within SGL_RS01100at 97.451 kb on + strand, within SGL_RS01100at 97.536 kb on + strand, within SGL_RS01100at 97.548 kb on + strand, within SGL_RS01100at 97.548 kb on + strand, within SGL_RS01100at 97.613 kb on - strand, within SGL_RS01100at 97.702 kb on + strand, within SGL_RS01100at 97.702 kb on + strand, within SGL_RS01100at 97.710 kb on - strand, within SGL_RS01100at 97.736 kb on - strand, within SGL_RS01100at 97.736 kb on - strand, within SGL_RS01100at 97.741 kb on - strand, within SGL_RS01100at 97.747 kb on - strand, within SGL_RS01100at 97.765 kb on + strand, within SGL_RS01100at 97.774 kb on + strand, within SGL_RS01100at 97.818 kb on - strand, within SGL_RS01100at 97.873 kb on - strand, within SGL_RS01100

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media bubbled with air enriched in 1% CO2 but diluted to prevent light attenuation
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95,505 + SGL_RS01090 0.16 +0.6
95,505 + SGL_RS01090 0.16 +0.2
95,654 - SGL_RS01090 0.33 +0.4
96,047 + SGL_RS01090 0.78 -0.2
96,053 - SGL_RS01090 0.78 +0.2
96,095 + SGL_RS01090 0.83 +0.2
96,830 - SGL_RS01095 0.82 +0.3
97,128 + -0.3
97,224 + -0.5
97,380 - SGL_RS01100 0.15 +0.2
97,406 - SGL_RS01100 0.17 +0.6
97,451 + SGL_RS01100 0.21 +0.2
97,451 + SGL_RS01100 0.21 -0.2
97,536 + SGL_RS01100 0.27 -0.6
97,548 + SGL_RS01100 0.28 +0.5
97,548 + SGL_RS01100 0.28 +0.7
97,613 - SGL_RS01100 0.33 -0.5
97,702 + SGL_RS01100 0.39 -0.0
97,702 + SGL_RS01100 0.39 +0.2
97,710 - SGL_RS01100 0.40 +0.4
97,736 - SGL_RS01100 0.42 -0.1
97,736 - SGL_RS01100 0.42 -0.5
97,741 - SGL_RS01100 0.42 -0.1
97,747 - SGL_RS01100 0.43 +0.0
97,765 + SGL_RS01100 0.44 +0.8
97,774 + SGL_RS01100 0.45 -0.2
97,818 - SGL_RS01100 0.48 -0.0
97,873 - SGL_RS01100 0.52 +0.0

Or see this region's nucleotide sequence