Experiment: growth in full media bubbled with ambient air but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS14740 and SGL_RS14745 are separated by 54 nucleotides SGL_RS14745 and SGL_RS14750 are separated by 56 nucleotides SGL_RS14750 and SGL_RS14755 are separated by 84 nucleotides
SGL_RS14740: SGL_RS14740 - Uma2 family endonuclease, at 2,759,808 to 2,760,380
_RS14740
SGL_RS14745: SGL_RS14745 - hypothetical protein, at 2,760,435 to 2,760,632
_RS14745
SGL_RS14750: SGL_RS14750 - TldD/PmbA family protein, at 2,760,689 to 2,762,029
_RS14750
SGL_RS14755: SGL_RS14755 - tetratricopeptide repeat protein, at 2,762,114 to 2,762,953
_RS14755
Position (kb)
2760
2761
2762
2763 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 2760.002 kb on + strand, within SGL_RS14740 at 2760.007 kb on + strand, within SGL_RS14740 at 2760.547 kb on + strand, within SGL_RS14745 at 2760.675 kb on - strand at 2760.704 kb on + strand at 2760.729 kb on + strand at 2760.850 kb on - strand, within SGL_RS14750 at 2760.860 kb on + strand, within SGL_RS14750 at 2760.866 kb on + strand, within SGL_RS14750 at 2761.025 kb on + strand, within SGL_RS14750 at 2761.164 kb on + strand, within SGL_RS14750 at 2761.178 kb on + strand, within SGL_RS14750 at 2761.183 kb on + strand, within SGL_RS14750 at 2761.205 kb on - strand, within SGL_RS14750 at 2761.210 kb on - strand, within SGL_RS14750 at 2761.558 kb on - strand, within SGL_RS14750 at 2761.612 kb on + strand, within SGL_RS14750 at 2761.644 kb on - strand, within SGL_RS14750 at 2761.699 kb on - strand, within SGL_RS14750 at 2761.867 kb on + strand, within SGL_RS14750 at 2761.867 kb on + strand, within SGL_RS14750 at 2761.867 kb on + strand, within SGL_RS14750 at 2761.877 kb on + strand, within SGL_RS14750 at 2761.916 kb on + strand at 2761.986 kb on - strand at 2762.022 kb on - strand at 2762.050 kb on + strand at 2762.087 kb on - strand at 2762.087 kb on - strand at 2762.235 kb on - strand, within SGL_RS14755 at 2762.267 kb on + strand, within SGL_RS14755 at 2762.284 kb on - strand, within SGL_RS14755 at 2762.341 kb on - strand, within SGL_RS14755 at 2762.341 kb on - strand, within SGL_RS14755 at 2762.343 kb on + strand, within SGL_RS14755 at 2762.382 kb on + strand, within SGL_RS14755 at 2762.382 kb on + strand, within SGL_RS14755 at 2762.382 kb on + strand, within SGL_RS14755 at 2762.382 kb on + strand, within SGL_RS14755 at 2762.387 kb on + strand, within SGL_RS14755 at 2762.475 kb on + strand, within SGL_RS14755 at 2762.550 kb on + strand, within SGL_RS14755 at 2762.728 kb on - strand, within SGL_RS14755 at 2762.813 kb on + strand, within SGL_RS14755 at 2762.843 kb on - strand, within SGL_RS14755 at 2762.856 kb on - strand, within SGL_RS14755 at 2762.985 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media bubbled with ambient air but diluted to prevent light attenuation remove 2,760,002 + SGL_RS14740 0.34 -0.0 2,760,007 + SGL_RS14740 0.35 +0.3 2,760,547 + SGL_RS14745 0.57 +0.3 2,760,675 - -1.0 2,760,704 + -0.3 2,760,729 + -2.4 2,760,850 - SGL_RS14750 0.12 -3.7 2,760,860 + SGL_RS14750 0.13 -3.4 2,760,866 + SGL_RS14750 0.13 -3.8 2,761,025 + SGL_RS14750 0.25 -0.7 2,761,164 + SGL_RS14750 0.35 -0.4 2,761,178 + SGL_RS14750 0.36 -6.1 2,761,183 + SGL_RS14750 0.37 -3.8 2,761,205 - SGL_RS14750 0.38 -3.7 2,761,210 - SGL_RS14750 0.39 -3.0 2,761,558 - SGL_RS14750 0.65 -5.9 2,761,612 + SGL_RS14750 0.69 -4.1 2,761,644 - SGL_RS14750 0.71 -3.1 2,761,699 - SGL_RS14750 0.75 -4.5 2,761,867 + SGL_RS14750 0.88 -5.6 2,761,867 + SGL_RS14750 0.88 -3.2 2,761,867 + SGL_RS14750 0.88 -3.0 2,761,877 + SGL_RS14750 0.89 -3.3 2,761,916 + -3.5 2,761,986 - -3.1 2,762,022 - -4.2 2,762,050 + +0.6 2,762,087 - +1.0 2,762,087 - -0.3 2,762,235 - SGL_RS14755 0.14 +0.6 2,762,267 + SGL_RS14755 0.18 -0.7 2,762,284 - SGL_RS14755 0.20 -2.7 2,762,341 - SGL_RS14755 0.27 +1.1 2,762,341 - SGL_RS14755 0.27 +0.2 2,762,343 + SGL_RS14755 0.27 +0.1 2,762,382 + SGL_RS14755 0.32 +0.7 2,762,382 + SGL_RS14755 0.32 +0.4 2,762,382 + SGL_RS14755 0.32 -0.6 2,762,382 + SGL_RS14755 0.32 -0.2 2,762,387 + SGL_RS14755 0.33 -0.6 2,762,475 + SGL_RS14755 0.43 +0.2 2,762,550 + SGL_RS14755 0.52 -0.2 2,762,728 - SGL_RS14755 0.73 +0.4 2,762,813 + SGL_RS14755 0.83 +0.5 2,762,843 - SGL_RS14755 0.87 +0.1 2,762,856 - SGL_RS14755 0.88 +0.2 2,762,985 - +0.4
Or see this region's nucleotide sequence