Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS13425

Experiment: growth in full media bubbled with ambient air but diluted to prevent light attenuation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS13415 and SGL_RS13420 are separated by 207 nucleotidesSGL_RS13420 and SGL_RS13425 are separated by 32 nucleotidesSGL_RS13425 and SGL_RS13430 are separated by 542 nucleotides SGL_RS13415: SGL_RS13415 - form I ribulose bisphosphate carboxylase large subunit, at 2,478,414 to 2,479,826 _RS13415 SGL_RS13420: SGL_RS13420 - chaperonin family protein RbcX, at 2,480,034 to 2,480,444 _RS13420 SGL_RS13425: SGL_RS13425 - ribulose bisphosphate carboxylase small subunit, at 2,480,477 to 2,480,818 _RS13425 SGL_RS13430: SGL_RS13430 - DUF4330 domain-containing protein, at 2,481,361 to 2,481,888 _RS13430 Position (kb) 2480 2481Strain fitness (log2 ratio) -1 0 1at 2480.931 kb on + strandat 2481.158 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media bubbled with ambient air but diluted to prevent light attenuation
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2,480,931 + -0.4
2,481,158 - +0.0

Or see this region's nucleotide sequence