Experiment: growth in full media bubbled with ambient air but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS07715 and SGL_RS07720 are separated by 265 nucleotides SGL_RS07720 and SGL_RS07725 are separated by 57 nucleotides SGL_RS07725 and SGL_RS07730 are separated by 61 nucleotides
SGL_RS07715: SGL_RS07715 - GNAT family N-acetyltransferase, at 1,248,284 to 1,250,176
_RS07715
SGL_RS07720: SGL_RS07720 - phosphate acetyltransferase, at 1,250,442 to 1,252,535
_RS07720
SGL_RS07725: SGL_RS07725 - hypothetical protein, at 1,252,593 to 1,253,207
_RS07725
SGL_RS07730: SGL_RS07730 - DNA/RNA nuclease SfsA, at 1,253,269 to 1,253,982
_RS07730
Position (kb)
1250
1251
1252
1253 Strain fitness (log2 ratio)
-2
-1
0
1 at 1249.449 kb on + strand, within SGL_RS07715 at 1249.496 kb on - strand, within SGL_RS07715 at 1249.806 kb on + strand, within SGL_RS07715 at 1249.962 kb on + strand, within SGL_RS07715 at 1250.694 kb on - strand, within SGL_RS07720 at 1250.703 kb on - strand, within SGL_RS07720 at 1250.921 kb on - strand, within SGL_RS07720 at 1250.951 kb on + strand, within SGL_RS07720 at 1251.014 kb on + strand, within SGL_RS07720 at 1251.122 kb on - strand, within SGL_RS07720 at 1251.155 kb on - strand, within SGL_RS07720 at 1251.198 kb on - strand, within SGL_RS07720 at 1251.199 kb on - strand, within SGL_RS07720 at 1251.258 kb on + strand, within SGL_RS07720 at 1251.269 kb on - strand, within SGL_RS07720 at 1251.313 kb on + strand, within SGL_RS07720 at 1251.320 kb on + strand, within SGL_RS07720 at 1251.838 kb on + strand, within SGL_RS07720 at 1251.846 kb on - strand, within SGL_RS07720 at 1251.852 kb on - strand, within SGL_RS07720 at 1251.952 kb on + strand, within SGL_RS07720 at 1252.051 kb on - strand, within SGL_RS07720 at 1252.285 kb on - strand, within SGL_RS07720 at 1252.292 kb on + strand, within SGL_RS07720 at 1252.302 kb on - strand, within SGL_RS07720 at 1252.387 kb on + strand at 1252.725 kb on + strand, within SGL_RS07725 at 1252.733 kb on - strand, within SGL_RS07725 at 1252.855 kb on + strand, within SGL_RS07725 at 1252.941 kb on - strand, within SGL_RS07725 at 1252.971 kb on - strand, within SGL_RS07725 at 1253.205 kb on - strand at 1253.283 kb on - strand at 1253.354 kb on + strand, within SGL_RS07730 at 1253.443 kb on + strand, within SGL_RS07730
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media bubbled with ambient air but diluted to prevent light attenuation remove 1,249,449 + SGL_RS07715 0.62 +0.0 1,249,496 - SGL_RS07715 0.64 +0.2 1,249,806 + SGL_RS07715 0.80 -0.4 1,249,962 + SGL_RS07715 0.89 +0.9 1,250,694 - SGL_RS07720 0.12 -1.8 1,250,703 - SGL_RS07720 0.12 -0.2 1,250,921 - SGL_RS07720 0.23 +0.7 1,250,951 + SGL_RS07720 0.24 +0.2 1,251,014 + SGL_RS07720 0.27 -0.6 1,251,122 - SGL_RS07720 0.32 -1.5 1,251,155 - SGL_RS07720 0.34 -0.4 1,251,198 - SGL_RS07720 0.36 -0.1 1,251,199 - SGL_RS07720 0.36 -0.7 1,251,258 + SGL_RS07720 0.39 +0.2 1,251,269 - SGL_RS07720 0.39 +0.6 1,251,313 + SGL_RS07720 0.42 +0.6 1,251,320 + SGL_RS07720 0.42 +0.3 1,251,838 + SGL_RS07720 0.67 -0.5 1,251,846 - SGL_RS07720 0.67 -1.2 1,251,852 - SGL_RS07720 0.67 -0.2 1,251,952 + SGL_RS07720 0.72 +0.4 1,252,051 - SGL_RS07720 0.77 -0.4 1,252,285 - SGL_RS07720 0.88 +0.2 1,252,292 + SGL_RS07720 0.88 +0.6 1,252,302 - SGL_RS07720 0.89 +0.6 1,252,387 + +0.4 1,252,725 + SGL_RS07725 0.21 -0.6 1,252,733 - SGL_RS07725 0.23 -0.2 1,252,855 + SGL_RS07725 0.43 -0.1 1,252,941 - SGL_RS07725 0.57 +0.8 1,252,971 - SGL_RS07725 0.61 -0.0 1,253,205 - +0.6 1,253,283 - -0.6 1,253,354 + SGL_RS07730 0.12 +0.0 1,253,443 + SGL_RS07730 0.24 +0.4
Or see this region's nucleotide sequence