Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS07720

Experiment: growth in full media bubbled with ambient air but diluted to prevent light attenuation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS07715 and SGL_RS07720 are separated by 265 nucleotidesSGL_RS07720 and SGL_RS07725 are separated by 57 nucleotidesSGL_RS07725 and SGL_RS07730 are separated by 61 nucleotides SGL_RS07715: SGL_RS07715 - GNAT family N-acetyltransferase, at 1,248,284 to 1,250,176 _RS07715 SGL_RS07720: SGL_RS07720 - phosphate acetyltransferase, at 1,250,442 to 1,252,535 _RS07720 SGL_RS07725: SGL_RS07725 - hypothetical protein, at 1,252,593 to 1,253,207 _RS07725 SGL_RS07730: SGL_RS07730 - DNA/RNA nuclease SfsA, at 1,253,269 to 1,253,982 _RS07730 Position (kb) 1250 1251 1252 1253Strain fitness (log2 ratio) -2 -1 0 1at 1249.449 kb on + strand, within SGL_RS07715at 1249.496 kb on - strand, within SGL_RS07715at 1249.806 kb on + strand, within SGL_RS07715at 1249.962 kb on + strand, within SGL_RS07715at 1250.694 kb on - strand, within SGL_RS07720at 1250.703 kb on - strand, within SGL_RS07720at 1250.921 kb on - strand, within SGL_RS07720at 1250.951 kb on + strand, within SGL_RS07720at 1251.014 kb on + strand, within SGL_RS07720at 1251.122 kb on - strand, within SGL_RS07720at 1251.155 kb on - strand, within SGL_RS07720at 1251.198 kb on - strand, within SGL_RS07720at 1251.199 kb on - strand, within SGL_RS07720at 1251.258 kb on + strand, within SGL_RS07720at 1251.269 kb on - strand, within SGL_RS07720at 1251.313 kb on + strand, within SGL_RS07720at 1251.320 kb on + strand, within SGL_RS07720at 1251.838 kb on + strand, within SGL_RS07720at 1251.846 kb on - strand, within SGL_RS07720at 1251.852 kb on - strand, within SGL_RS07720at 1251.952 kb on + strand, within SGL_RS07720at 1252.051 kb on - strand, within SGL_RS07720at 1252.285 kb on - strand, within SGL_RS07720at 1252.292 kb on + strand, within SGL_RS07720at 1252.302 kb on - strand, within SGL_RS07720at 1252.387 kb on + strandat 1252.725 kb on + strand, within SGL_RS07725at 1252.733 kb on - strand, within SGL_RS07725at 1252.855 kb on + strand, within SGL_RS07725at 1252.941 kb on - strand, within SGL_RS07725at 1252.971 kb on - strand, within SGL_RS07725at 1253.205 kb on - strandat 1253.283 kb on - strandat 1253.354 kb on + strand, within SGL_RS07730at 1253.443 kb on + strand, within SGL_RS07730

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media bubbled with ambient air but diluted to prevent light attenuation
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1,249,449 + SGL_RS07715 0.62 +0.0
1,249,496 - SGL_RS07715 0.64 +0.2
1,249,806 + SGL_RS07715 0.80 -0.4
1,249,962 + SGL_RS07715 0.89 +0.9
1,250,694 - SGL_RS07720 0.12 -1.8
1,250,703 - SGL_RS07720 0.12 -0.2
1,250,921 - SGL_RS07720 0.23 +0.7
1,250,951 + SGL_RS07720 0.24 +0.2
1,251,014 + SGL_RS07720 0.27 -0.6
1,251,122 - SGL_RS07720 0.32 -1.5
1,251,155 - SGL_RS07720 0.34 -0.4
1,251,198 - SGL_RS07720 0.36 -0.1
1,251,199 - SGL_RS07720 0.36 -0.7
1,251,258 + SGL_RS07720 0.39 +0.2
1,251,269 - SGL_RS07720 0.39 +0.6
1,251,313 + SGL_RS07720 0.42 +0.6
1,251,320 + SGL_RS07720 0.42 +0.3
1,251,838 + SGL_RS07720 0.67 -0.5
1,251,846 - SGL_RS07720 0.67 -1.2
1,251,852 - SGL_RS07720 0.67 -0.2
1,251,952 + SGL_RS07720 0.72 +0.4
1,252,051 - SGL_RS07720 0.77 -0.4
1,252,285 - SGL_RS07720 0.88 +0.2
1,252,292 + SGL_RS07720 0.88 +0.6
1,252,302 - SGL_RS07720 0.89 +0.6
1,252,387 + +0.4
1,252,725 + SGL_RS07725 0.21 -0.6
1,252,733 - SGL_RS07725 0.23 -0.2
1,252,855 + SGL_RS07725 0.43 -0.1
1,252,941 - SGL_RS07725 0.57 +0.8
1,252,971 - SGL_RS07725 0.61 -0.0
1,253,205 - +0.6
1,253,283 - -0.6
1,253,354 + SGL_RS07730 0.12 +0.0
1,253,443 + SGL_RS07730 0.24 +0.4

Or see this region's nucleotide sequence