Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS04915

Experiment: growth in full media bubbled with ambient air but diluted to prevent light attenuation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS04910 and SGL_RS04915 are separated by 214 nucleotidesSGL_RS04915 and SGL_RS04920 are separated by 34 nucleotides SGL_RS04910: SGL_RS04910 - SwmB domain-containing protein, at 646,129 to 658,047 _RS04910 SGL_RS04915: SGL_RS04915 - magnesium chelatase ATPase subunit I, at 658,262 to 659,335 _RS04915 SGL_RS04920: SGL_RS04920 - tyrosine--tRNA ligase, at 659,370 to 660,584 _RS04920 Position (kb) 658 659 660Strain fitness (log2 ratio) -1 0 1at 657.286 kb on + strandat 657.286 kb on + strandat 657.288 kb on - strandat 657.622 kb on + strandat 657.674 kb on + strandat 657.698 kb on + strandat 657.708 kb on - strandat 657.709 kb on + strandat 657.709 kb on + strandat 657.717 kb on - strandat 657.717 kb on - strandat 657.786 kb on + strandat 657.926 kb on - strandat 657.964 kb on - strandat 658.081 kb on + strandat 658.103 kb on - strandat 658.139 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media bubbled with ambient air but diluted to prevent light attenuation
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657,286 + +0.4
657,286 + +0.2
657,288 - +0.2
657,622 + -0.3
657,674 + +0.2
657,698 + -0.7
657,708 - +0.2
657,709 + -0.9
657,709 + -0.3
657,717 - -0.4
657,717 - +0.3
657,786 + -1.0
657,926 - +1.4
657,964 - -0.7
658,081 + +0.5
658,103 - -0.6
658,139 + +0.3

Or see this region's nucleotide sequence