Experiment: growth in full media bubbled with ambient air but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03930 and SGL_RS03935 are separated by 11 nucleotides SGL_RS03935 and SGL_RS03940 are separated by 75 nucleotides
SGL_RS03930: SGL_RS03930 - hypothetical protein, at 432,779 to 434,308
_RS03930
SGL_RS03935: SGL_RS03935 - SLC13 family permease, at 434,320 to 436,158
_RS03935
SGL_RS03940: SGL_RS03940 - polysaccharide pyruvyl transferase CsaB, at 436,234 to 437,265
_RS03940
Position (kb) 434
435
436
437 Strain fitness (log2 ratio) -2
-1
0
1
2 at 433.624 kb on - strand, within SGL_RS03930 at 433.795 kb on + strand, within SGL_RS03930 at 433.804 kb on - strand, within SGL_RS03930 at 433.816 kb on - strand, within SGL_RS03930 at 434.092 kb on + strand, within SGL_RS03930 at 434.092 kb on + strand, within SGL_RS03930 at 434.108 kb on + strand, within SGL_RS03930 at 434.324 kb on - strand at 434.363 kb on + strand at 434.386 kb on + strand at 434.394 kb on - strand at 434.520 kb on - strand, within SGL_RS03935 at 434.580 kb on + strand, within SGL_RS03935 at 434.632 kb on - strand, within SGL_RS03935 at 434.643 kb on - strand, within SGL_RS03935 at 434.728 kb on - strand, within SGL_RS03935 at 434.929 kb on - strand, within SGL_RS03935 at 434.946 kb on - strand, within SGL_RS03935 at 435.096 kb on + strand, within SGL_RS03935 at 435.137 kb on - strand, within SGL_RS03935 at 435.275 kb on - strand, within SGL_RS03935 at 435.322 kb on + strand, within SGL_RS03935 at 435.529 kb on + strand, within SGL_RS03935 at 435.597 kb on - strand, within SGL_RS03935 at 435.676 kb on - strand, within SGL_RS03935 at 435.707 kb on + strand, within SGL_RS03935 at 435.715 kb on - strand, within SGL_RS03935 at 435.721 kb on + strand, within SGL_RS03935 at 435.808 kb on + strand, within SGL_RS03935 at 435.808 kb on - strand, within SGL_RS03935 at 435.996 kb on + strand at 436.069 kb on - strand at 436.079 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media bubbled with ambient air but diluted to prevent light attenuation remove 433,624 - SGL_RS03930 0.55 +0.3 433,795 + SGL_RS03930 0.66 -1.2 433,804 - SGL_RS03930 0.67 -2.4 433,816 - SGL_RS03930 0.68 -2.0 434,092 + SGL_RS03930 0.86 -0.4 434,092 + SGL_RS03930 0.86 -0.9 434,108 + SGL_RS03930 0.87 -1.0 434,324 - -0.2 434,363 + +1.1 434,386 + +1.7 434,394 - +1.9 434,520 - SGL_RS03935 0.11 +1.9 434,580 + SGL_RS03935 0.14 +1.3 434,632 - SGL_RS03935 0.17 +1.7 434,643 - SGL_RS03935 0.18 +1.9 434,728 - SGL_RS03935 0.22 +1.7 434,929 - SGL_RS03935 0.33 +1.7 434,946 - SGL_RS03935 0.34 +1.2 435,096 + SGL_RS03935 0.42 +1.9 435,137 - SGL_RS03935 0.44 +1.0 435,275 - SGL_RS03935 0.52 +1.8 435,322 + SGL_RS03935 0.54 +2.7 435,529 + SGL_RS03935 0.66 +1.7 435,597 - SGL_RS03935 0.69 +2.1 435,676 - SGL_RS03935 0.74 +1.2 435,707 + SGL_RS03935 0.75 -0.1 435,715 - SGL_RS03935 0.76 +1.2 435,721 + SGL_RS03935 0.76 +2.2 435,808 + SGL_RS03935 0.81 +1.4 435,808 - SGL_RS03935 0.81 +1.9 435,996 + +2.4 436,069 - -0.4 436,079 + +1.8
Or see this region's nucleotide sequence