Experiment: growth in full media bubbled with ambient air but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03470 and SGL_RS03475 are separated by 135 nucleotides SGL_RS03475 and SGL_RS03480 are separated by 11 nucleotides SGL_RS03480 and SGL_RS03485 are separated by 266 nucleotides
SGL_RS03470: SGL_RS03470 - methionine adenosyltransferase, at 339,737 to 340,999
_RS03470
SGL_RS03475: SGL_RS03475 - tRNA dihydrouridine(20/20a) synthase DusA, at 341,135 to 342,139
_RS03475
SGL_RS03480: SGL_RS03480 - Uma2 family endonuclease, at 342,151 to 342,759
_RS03480
SGL_RS03485: SGL_RS03485 - translation initiation factor IF-3, at 343,026 to 343,559
_RS03485
Position (kb) 341
342
343 Strain fitness (log2 ratio) -1
0
1
2 at 341.167 kb on - strand at 341.188 kb on + strand at 341.212 kb on - strand at 341.307 kb on - strand, within SGL_RS03475 at 341.392 kb on - strand, within SGL_RS03475 at 341.393 kb on + strand, within SGL_RS03475 at 341.399 kb on + strand, within SGL_RS03475 at 341.408 kb on + strand, within SGL_RS03475 at 341.439 kb on + strand, within SGL_RS03475 at 341.446 kb on + strand, within SGL_RS03475 at 341.473 kb on - strand, within SGL_RS03475 at 341.490 kb on + strand, within SGL_RS03475 at 341.490 kb on + strand, within SGL_RS03475 at 341.603 kb on - strand, within SGL_RS03475 at 341.632 kb on - strand, within SGL_RS03475 at 341.694 kb on - strand, within SGL_RS03475 at 341.763 kb on - strand, within SGL_RS03475 at 341.769 kb on - strand, within SGL_RS03475 at 341.843 kb on + strand, within SGL_RS03475 at 341.879 kb on - strand, within SGL_RS03475 at 341.980 kb on - strand, within SGL_RS03475 at 342.004 kb on - strand, within SGL_RS03475 at 342.324 kb on + strand, within SGL_RS03480 at 342.368 kb on - strand, within SGL_RS03480 at 342.413 kb on - strand, within SGL_RS03480 at 342.413 kb on - strand, within SGL_RS03480 at 342.652 kb on - strand, within SGL_RS03480 at 342.730 kb on + strand at 342.738 kb on - strand at 342.797 kb on - strand at 342.810 kb on - strand at 342.811 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media bubbled with ambient air but diluted to prevent light attenuation remove 341,167 - -0.0 341,188 + -0.1 341,212 - +1.6 341,307 - SGL_RS03475 0.17 +2.2 341,392 - SGL_RS03475 0.26 +1.8 341,393 + SGL_RS03475 0.26 +1.7 341,399 + SGL_RS03475 0.26 +1.4 341,408 + SGL_RS03475 0.27 +1.9 341,439 + SGL_RS03475 0.30 +2.2 341,446 + SGL_RS03475 0.31 +0.9 341,473 - SGL_RS03475 0.34 +1.0 341,490 + SGL_RS03475 0.35 +1.1 341,490 + SGL_RS03475 0.35 +1.2 341,603 - SGL_RS03475 0.47 +1.9 341,632 - SGL_RS03475 0.49 +0.9 341,694 - SGL_RS03475 0.56 +1.0 341,763 - SGL_RS03475 0.62 +1.3 341,769 - SGL_RS03475 0.63 +0.6 341,843 + SGL_RS03475 0.70 +0.9 341,879 - SGL_RS03475 0.74 +1.4 341,980 - SGL_RS03475 0.84 +1.1 342,004 - SGL_RS03475 0.86 +1.4 342,324 + SGL_RS03480 0.28 +0.6 342,368 - SGL_RS03480 0.36 -0.0 342,413 - SGL_RS03480 0.43 -0.6 342,413 - SGL_RS03480 0.43 +0.4 342,652 - SGL_RS03480 0.82 -0.0 342,730 + +0.5 342,738 - +0.3 342,797 - +0.3 342,810 - +0.4 342,811 - -0.3
Or see this region's nucleotide sequence