Experiment: growth in full media bubbled with ambient air but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03235 and SGL_RS03240 are separated by 56 nucleotides SGL_RS03240 and SGL_RS03245 are separated by 451 nucleotides
SGL_RS03235: SGL_RS03235 - C-3',4' desaturase CrtD, at 289,322 to 290,845
_RS03235
SGL_RS03240: SGL_RS03240 - YggT family protein, at 290,902 to 291,174
_RS03240
SGL_RS03245: SGL_RS03245 - Fe(3+) ABC transporter substrate-binding protein, at 291,626 to 292,708
_RS03245
Position (kb) 290
291
292 Strain fitness (log2 ratio) -1
0
1
2
3 at 289.924 kb on + strand, within SGL_RS03235 at 289.947 kb on + strand, within SGL_RS03235 at 289.966 kb on + strand, within SGL_RS03235 at 289.969 kb on - strand, within SGL_RS03235 at 289.974 kb on + strand, within SGL_RS03235 at 290.017 kb on - strand, within SGL_RS03235 at 290.040 kb on + strand, within SGL_RS03235 at 290.048 kb on - strand, within SGL_RS03235 at 290.111 kb on - strand, within SGL_RS03235 at 290.131 kb on - strand, within SGL_RS03235 at 290.136 kb on - strand, within SGL_RS03235 at 290.141 kb on - strand, within SGL_RS03235 at 290.158 kb on - strand, within SGL_RS03235 at 290.216 kb on + strand, within SGL_RS03235 at 290.280 kb on - strand, within SGL_RS03235 at 290.316 kb on - strand, within SGL_RS03235 at 290.336 kb on + strand, within SGL_RS03235 at 290.437 kb on - strand, within SGL_RS03235 at 290.497 kb on + strand, within SGL_RS03235 at 290.504 kb on - strand, within SGL_RS03235 at 290.536 kb on - strand, within SGL_RS03235 at 290.645 kb on + strand, within SGL_RS03235 at 290.670 kb on + strand, within SGL_RS03235 at 290.691 kb on + strand, within SGL_RS03235 at 290.691 kb on + strand, within SGL_RS03235 at 290.824 kb on - strand at 290.939 kb on + strand, within SGL_RS03240 at 290.940 kb on + strand, within SGL_RS03240 at 291.003 kb on - strand, within SGL_RS03240 at 291.062 kb on + strand, within SGL_RS03240 at 291.062 kb on + strand, within SGL_RS03240 at 291.070 kb on - strand, within SGL_RS03240 at 291.070 kb on - strand, within SGL_RS03240 at 291.070 kb on - strand, within SGL_RS03240 at 291.716 kb on - strand at 291.728 kb on - strand at 291.752 kb on - strand, within SGL_RS03245 at 291.771 kb on - strand, within SGL_RS03245 at 291.820 kb on - strand, within SGL_RS03245 at 291.891 kb on - strand, within SGL_RS03245 at 291.898 kb on + strand, within SGL_RS03245 at 291.898 kb on + strand, within SGL_RS03245
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media bubbled with ambient air but diluted to prevent light attenuation remove 289,924 + SGL_RS03235 0.40 +1.0 289,947 + SGL_RS03235 0.41 +0.5 289,966 + SGL_RS03235 0.42 +1.0 289,969 - SGL_RS03235 0.42 -0.4 289,974 + SGL_RS03235 0.43 +1.0 290,017 - SGL_RS03235 0.46 +1.5 290,040 + SGL_RS03235 0.47 +2.3 290,048 - SGL_RS03235 0.48 +1.0 290,111 - SGL_RS03235 0.52 +0.7 290,131 - SGL_RS03235 0.53 +0.6 290,136 - SGL_RS03235 0.53 +1.0 290,141 - SGL_RS03235 0.54 +1.0 290,158 - SGL_RS03235 0.55 -0.1 290,216 + SGL_RS03235 0.59 +0.3 290,280 - SGL_RS03235 0.63 +0.3 290,316 - SGL_RS03235 0.65 +1.0 290,336 + SGL_RS03235 0.67 +1.0 290,437 - SGL_RS03235 0.73 +0.3 290,497 + SGL_RS03235 0.77 +1.7 290,504 - SGL_RS03235 0.78 +0.9 290,536 - SGL_RS03235 0.80 +0.7 290,645 + SGL_RS03235 0.87 +1.2 290,670 + SGL_RS03235 0.88 +0.9 290,691 + SGL_RS03235 0.90 +0.4 290,691 + SGL_RS03235 0.90 +1.2 290,824 - +0.3 290,939 + SGL_RS03240 0.14 +2.0 290,940 + SGL_RS03240 0.14 +2.0 291,003 - SGL_RS03240 0.37 +1.4 291,062 + SGL_RS03240 0.59 +2.5 291,062 + SGL_RS03240 0.59 +1.5 291,070 - SGL_RS03240 0.62 +1.2 291,070 - SGL_RS03240 0.62 +1.6 291,070 - SGL_RS03240 0.62 +1.6 291,716 - +2.7 291,728 - +3.1 291,752 - SGL_RS03245 0.12 +2.4 291,771 - SGL_RS03245 0.13 +2.3 291,820 - SGL_RS03245 0.18 +2.8 291,891 - SGL_RS03245 0.24 +2.8 291,898 + SGL_RS03245 0.25 +1.7 291,898 + SGL_RS03245 0.25 +2.9
Or see this region's nucleotide sequence