Experiment: growth in full media bubbled with ambient air
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS06290 and SGL_RS06295 are separated by 116 nucleotides SGL_RS06295 and SGL_RS06300 are separated by 397 nucleotides
SGL_RS06290: SGL_RS06290 - NADH-quinone oxidoreductase subunit M, at 936,768 to 938,276
_RS06290
SGL_RS06295: SGL_RS06295 - NAD(P)H-quinone oxidoreductase subunit F, at 938,393 to 940,240
_RS06295
SGL_RS06300: SGL_RS06300 - hypothetical protein, at 940,638 to 941,270
_RS06300
Position (kb) 938
939
940
941 Strain fitness (log2 ratio) -2
-1
0
1 at 937.479 kb on + strand, within SGL_RS06290 at 937.516 kb on - strand, within SGL_RS06290 at 937.557 kb on + strand, within SGL_RS06290 at 937.602 kb on - strand, within SGL_RS06290 at 937.788 kb on - strand, within SGL_RS06290 at 938.334 kb on + strand at 938.841 kb on - strand, within SGL_RS06295 at 939.039 kb on - strand, within SGL_RS06295 at 939.050 kb on - strand, within SGL_RS06295 at 939.075 kb on - strand, within SGL_RS06295 at 939.092 kb on - strand, within SGL_RS06295 at 939.122 kb on + strand, within SGL_RS06295 at 939.149 kb on + strand, within SGL_RS06295 at 939.245 kb on + strand, within SGL_RS06295 at 939.245 kb on + strand, within SGL_RS06295 at 939.572 kb on + strand, within SGL_RS06295 at 939.733 kb on + strand, within SGL_RS06295 at 939.923 kb on - strand, within SGL_RS06295 at 939.965 kb on + strand, within SGL_RS06295 at 940.072 kb on + strand at 940.123 kb on + strand at 940.192 kb on - strand at 940.687 kb on - strand at 940.755 kb on - strand, within SGL_RS06300 at 940.757 kb on + strand, within SGL_RS06300 at 940.757 kb on + strand, within SGL_RS06300 at 940.765 kb on - strand, within SGL_RS06300 at 941.007 kb on + strand, within SGL_RS06300 at 941.050 kb on - strand, within SGL_RS06300 at 941.050 kb on - strand, within SGL_RS06300 at 941.108 kb on + strand, within SGL_RS06300
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media bubbled with ambient air remove 937,479 + SGL_RS06290 0.47 -0.8 937,516 - SGL_RS06290 0.50 -1.1 937,557 + SGL_RS06290 0.52 -0.6 937,602 - SGL_RS06290 0.55 +0.4 937,788 - SGL_RS06290 0.68 -1.5 938,334 + -0.6 938,841 - SGL_RS06295 0.24 -0.7 939,039 - SGL_RS06295 0.35 +0.2 939,050 - SGL_RS06295 0.36 +0.2 939,075 - SGL_RS06295 0.37 -0.4 939,092 - SGL_RS06295 0.38 -0.7 939,122 + SGL_RS06295 0.39 -1.6 939,149 + SGL_RS06295 0.41 -0.8 939,245 + SGL_RS06295 0.46 -0.1 939,245 + SGL_RS06295 0.46 -0.4 939,572 + SGL_RS06295 0.64 -1.9 939,733 + SGL_RS06295 0.73 -0.5 939,923 - SGL_RS06295 0.83 -0.8 939,965 + SGL_RS06295 0.85 -0.0 940,072 + -0.8 940,123 + -0.3 940,192 - -0.5 940,687 - +0.0 940,755 - SGL_RS06300 0.18 -0.6 940,757 + SGL_RS06300 0.19 -0.3 940,757 + SGL_RS06300 0.19 +0.7 940,765 - SGL_RS06300 0.20 +0.4 941,007 + SGL_RS06300 0.58 -0.3 941,050 - SGL_RS06300 0.65 -0.9 941,050 - SGL_RS06300 0.65 -0.1 941,108 + SGL_RS06300 0.74 +0.1
Or see this region's nucleotide sequence