Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS17685

Experiment: growth in full media supplemented with 5mM sodum metaarsenite but diluted to prevent light attenuation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS17680 and SGL_RS17685 are separated by 549 nucleotidesSGL_RS17685 and SGL_RS17690 are separated by 12 nucleotidesSGL_RS17690 and SGL_RS17695 are separated by 18 nucleotides SGL_RS17680: SGL_RS17680 - hypothetical protein, at 3,421,907 to 3,422,482 _RS17680 SGL_RS17685: SGL_RS17685 - ArsB/NhaD family transporter, at 3,423,032 to 3,424,381 _RS17685 SGL_RS17690: SGL_RS17690 - hypothetical protein, at 3,424,394 to 3,424,648 _RS17690 SGL_RS17695: SGL_RS17695 - DNA adenine methylase, at 3,424,667 to 3,425,524 _RS17695 Position (kb) 3423 3424 3425Strain fitness (log2 ratio) -3 -2 -1 0 1at 3422.237 kb on - strand, within SGL_RS17680at 3423.194 kb on + strand, within SGL_RS17685at 3423.202 kb on - strand, within SGL_RS17685at 3423.333 kb on + strand, within SGL_RS17685at 3423.333 kb on + strand, within SGL_RS17685at 3423.399 kb on - strand, within SGL_RS17685at 3423.410 kb on - strand, within SGL_RS17685at 3423.705 kb on - strand, within SGL_RS17685at 3423.830 kb on - strand, within SGL_RS17685at 3423.830 kb on - strand, within SGL_RS17685at 3423.990 kb on + strand, within SGL_RS17685at 3424.083 kb on + strand, within SGL_RS17685at 3424.091 kb on - strand, within SGL_RS17685at 3424.204 kb on - strand, within SGL_RS17685at 3424.364 kb on - strandat 3424.520 kb on + strand, within SGL_RS17690at 3424.625 kb on + strandat 3424.858 kb on + strand, within SGL_RS17695

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 5mM sodum metaarsenite but diluted to prevent light attenuation
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3,422,237 - SGL_RS17680 0.57 -0.0
3,423,194 + SGL_RS17685 0.12 -1.7
3,423,202 - SGL_RS17685 0.13 -2.4
3,423,333 + SGL_RS17685 0.22 -2.9
3,423,333 + SGL_RS17685 0.22 -3.6
3,423,399 - SGL_RS17685 0.27 -1.6
3,423,410 - SGL_RS17685 0.28 -2.7
3,423,705 - SGL_RS17685 0.50 -2.9
3,423,830 - SGL_RS17685 0.59 -2.5
3,423,830 - SGL_RS17685 0.59 -2.2
3,423,990 + SGL_RS17685 0.71 -3.6
3,424,083 + SGL_RS17685 0.78 -2.4
3,424,091 - SGL_RS17685 0.78 -2.5
3,424,204 - SGL_RS17685 0.87 -2.4
3,424,364 - +0.9
3,424,520 + SGL_RS17690 0.49 -0.3
3,424,625 + -0.9
3,424,858 + SGL_RS17695 0.22 -3.1

Or see this region's nucleotide sequence