Experiment: growth in full media supplemented with 5mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS16905 and SGL_RS16910 are separated by 4 nucleotides SGL_RS16910 and SGL_RS19495 are separated by 129 nucleotides SGL_RS19495 and SGL_RS16915 are separated by 14 nucleotides SGL_RS16915 and SGL_RS16920 are separated by 493 nucleotides
SGL_RS16905: SGL_RS16905 - ATP-dependent protease ATP-binding subunit ClpX, at 3,244,079 to 3,245,416
_RS16905
SGL_RS16910: SGL_RS16910 - ATP-dependent Clp endopeptidase proteolytic subunit ClpP, at 3,245,421 to 3,246,101
_RS16910
SGL_RS19495: SGL_RS19495 - hypothetical protein, at 3,246,231 to 3,246,386
_RS19495
SGL_RS16915: SGL_RS16915 - trigger factor, at 3,246,401 to 3,247,816
_RS16915
SGL_RS16920: SGL_RS16920 - aspartate-semialdehyde dehydrogenase, at 3,248,310 to 3,249,326
_RS16920
Position (kb) 3246
3247
3248 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 3245.595 kb on - strand, within SGL_RS16910 at 3246.277 kb on + strand, within SGL_RS19495 at 3246.298 kb on + strand, within SGL_RS19495 at 3246.299 kb on + strand, within SGL_RS19495 at 3246.398 kb on + strand at 3246.467 kb on + strand at 3246.477 kb on + strand at 3246.489 kb on - strand at 3246.987 kb on - strand, within SGL_RS16915 at 3247.112 kb on - strand, within SGL_RS16915 at 3247.198 kb on + strand, within SGL_RS16915 at 3247.295 kb on + strand, within SGL_RS16915 at 3247.477 kb on + strand, within SGL_RS16915 at 3247.485 kb on - strand, within SGL_RS16915 at 3247.624 kb on - strand, within SGL_RS16915 at 3247.656 kb on + strand, within SGL_RS16915 at 3247.876 kb on - strand at 3247.993 kb on + strand at 3248.213 kb on + strand at 3248.301 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 5mM sodum metaarsenite but diluted to prevent light attenuation remove 3,245,595 - SGL_RS16910 0.26 -1.8 3,246,277 + SGL_RS19495 0.29 +0.0 3,246,298 + SGL_RS19495 0.43 -0.1 3,246,299 + SGL_RS19495 0.44 +0.4 3,246,398 + -0.7 3,246,467 + -0.9 3,246,477 + +0.2 3,246,489 - +0.2 3,246,987 - SGL_RS16915 0.41 -3.3 3,247,112 - SGL_RS16915 0.50 +0.7 3,247,198 + SGL_RS16915 0.56 -4.0 3,247,295 + SGL_RS16915 0.63 -1.4 3,247,477 + SGL_RS16915 0.76 -2.5 3,247,485 - SGL_RS16915 0.77 -2.8 3,247,624 - SGL_RS16915 0.86 -2.0 3,247,656 + SGL_RS16915 0.89 -2.1 3,247,876 - -1.0 3,247,993 + -3.2 3,248,213 + -0.3 3,248,301 + -0.0
Or see this region's nucleotide sequence