Experiment: growth in full media supplemented with 5mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11875 and SGL_RS11880 overlap by 37 nucleotides SGL_RS11880 and SGL_RS11885 are separated by 46 nucleotides SGL_RS11885 and SGL_RS11890 are separated by 494 nucleotides
SGL_RS11875: SGL_RS11875 - aromatic ring-hydroxylating dioxygenase subunit alpha, at 2,118,198 to 2,119,337
_RS11875
SGL_RS11880: SGL_RS11880 - hypothetical protein, at 2,119,301 to 2,120,020
_RS11880
SGL_RS11885: SGL_RS11885 - fatty acid desaturase, at 2,120,067 to 2,121,146
_RS11885
SGL_RS11890: SGL_RS11890 - NAD-binding protein, at 2,121,641 to 2,123,347
_RS11890
Position (kb)
2120
2121
2122 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2119.218 kb on - strand, within SGL_RS11875 at 2119.413 kb on - strand, within SGL_RS11880 at 2119.480 kb on + strand, within SGL_RS11880 at 2119.488 kb on - strand, within SGL_RS11880 at 2119.495 kb on - strand, within SGL_RS11880 at 2119.704 kb on - strand, within SGL_RS11880 at 2119.722 kb on + strand, within SGL_RS11880 at 2119.773 kb on + strand, within SGL_RS11880 at 2119.773 kb on + strand, within SGL_RS11880 at 2119.781 kb on - strand, within SGL_RS11880 at 2119.952 kb on - strand at 2120.087 kb on + strand at 2120.087 kb on - strand at 2120.102 kb on + strand at 2120.382 kb on + strand, within SGL_RS11885 at 2120.524 kb on - strand, within SGL_RS11885 at 2120.866 kb on + strand, within SGL_RS11885 at 2120.881 kb on - strand, within SGL_RS11885 at 2120.943 kb on + strand, within SGL_RS11885 at 2121.269 kb on + strand at 2121.687 kb on + strand at 2121.751 kb on - strand at 2121.806 kb on - strand at 2121.886 kb on + strand, within SGL_RS11890 at 2121.886 kb on + strand, within SGL_RS11890 at 2122.021 kb on + strand, within SGL_RS11890 at 2122.060 kb on + strand, within SGL_RS11890 at 2122.060 kb on + strand, within SGL_RS11890
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 5mM sodum metaarsenite but diluted to prevent light attenuation remove 2,119,218 - SGL_RS11875 0.89 +0.0 2,119,413 - SGL_RS11880 0.16 +0.2 2,119,480 + SGL_RS11880 0.25 +0.1 2,119,488 - SGL_RS11880 0.26 -1.0 2,119,495 - SGL_RS11880 0.27 +0.4 2,119,704 - SGL_RS11880 0.56 +0.5 2,119,722 + SGL_RS11880 0.58 +0.0 2,119,773 + SGL_RS11880 0.66 +0.0 2,119,773 + SGL_RS11880 0.66 +0.1 2,119,781 - SGL_RS11880 0.67 -0.3 2,119,952 - -0.4 2,120,087 + -2.0 2,120,087 - -2.3 2,120,102 + -3.3 2,120,382 + SGL_RS11885 0.29 -1.1 2,120,524 - SGL_RS11885 0.42 -1.5 2,120,866 + SGL_RS11885 0.74 -1.9 2,120,881 - SGL_RS11885 0.75 -1.4 2,120,943 + SGL_RS11885 0.81 -2.0 2,121,269 + -0.2 2,121,687 + -0.1 2,121,751 - +0.5 2,121,806 - +0.1 2,121,886 + SGL_RS11890 0.14 +0.3 2,121,886 + SGL_RS11890 0.14 -0.4 2,122,021 + SGL_RS11890 0.22 -0.1 2,122,060 + SGL_RS11890 0.25 -0.3 2,122,060 + SGL_RS11890 0.25 -0.2
Or see this region's nucleotide sequence