Experiment: growth in full media supplemented with 5mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS10415 and SGL_RS10420 overlap by 4 nucleotides SGL_RS10420 and SGL_RS10425 overlap by 4 nucleotides SGL_RS10425 and SGL_RS10430 are separated by 149 nucleotides
SGL_RS10415: SGL_RS10415 - SpoIIE family protein phosphatase, at 1,811,746 to 1,813,557
_RS10415
SGL_RS10420: SGL_RS10420 - methionine ABC transporter ATP-binding protein, at 1,813,554 to 1,814,234
_RS10420
SGL_RS10425: SGL_RS10425 - aromatic ring-hydroxylating dioxygenase subunit alpha, at 1,814,231 to 1,815,304
_RS10425
SGL_RS10430: SGL_RS10430 - S1 RNA-binding domain-containing protein, at 1,815,454 to 1,816,371
_RS10430
Position (kb)
1814
1815
1816 Strain fitness (log2 ratio)
-2
-1
0
1 at 1813.343 kb on + strand, within SGL_RS10415 at 1813.361 kb on - strand, within SGL_RS10415 at 1813.697 kb on + strand, within SGL_RS10420 at 1813.874 kb on + strand, within SGL_RS10420 at 1814.255 kb on - strand at 1814.392 kb on - strand, within SGL_RS10425 at 1814.615 kb on + strand, within SGL_RS10425 at 1814.680 kb on - strand, within SGL_RS10425 at 1814.728 kb on + strand, within SGL_RS10425 at 1814.747 kb on - strand, within SGL_RS10425 at 1814.906 kb on + strand, within SGL_RS10425 at 1815.018 kb on - strand, within SGL_RS10425 at 1815.134 kb on + strand, within SGL_RS10425 at 1815.221 kb on + strand at 1815.242 kb on + strand at 1815.295 kb on - strand at 1815.356 kb on + strand at 1815.356 kb on + strand at 1815.356 kb on + strand at 1815.356 kb on + strand at 1815.356 kb on + strand at 1815.356 kb on + strand at 1815.356 kb on + strand at 1815.513 kb on - strand at 1815.625 kb on + strand, within SGL_RS10430 at 1815.736 kb on - strand, within SGL_RS10430 at 1815.793 kb on - strand, within SGL_RS10430 at 1815.819 kb on + strand, within SGL_RS10430 at 1816.105 kb on + strand, within SGL_RS10430 at 1816.149 kb on + strand, within SGL_RS10430 at 1816.152 kb on + strand, within SGL_RS10430 at 1816.159 kb on + strand, within SGL_RS10430
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 5mM sodum metaarsenite but diluted to prevent light attenuation remove 1,813,343 + SGL_RS10415 0.88 +0.6 1,813,361 - SGL_RS10415 0.89 -0.6 1,813,697 + SGL_RS10420 0.21 -1.4 1,813,874 + SGL_RS10420 0.47 -0.3 1,814,255 - -0.2 1,814,392 - SGL_RS10425 0.15 -0.7 1,814,615 + SGL_RS10425 0.36 -1.9 1,814,680 - SGL_RS10425 0.42 -0.7 1,814,728 + SGL_RS10425 0.46 -2.3 1,814,747 - SGL_RS10425 0.48 -1.5 1,814,906 + SGL_RS10425 0.63 -1.5 1,815,018 - SGL_RS10425 0.73 -1.3 1,815,134 + SGL_RS10425 0.84 +0.3 1,815,221 + -0.2 1,815,242 + -1.1 1,815,295 - +0.3 1,815,356 + -0.6 1,815,356 + -1.0 1,815,356 + +0.3 1,815,356 + -0.7 1,815,356 + -0.4 1,815,356 + -0.8 1,815,356 + -1.3 1,815,513 - -0.1 1,815,625 + SGL_RS10430 0.19 -0.1 1,815,736 - SGL_RS10430 0.31 -0.1 1,815,793 - SGL_RS10430 0.37 -0.3 1,815,819 + SGL_RS10430 0.40 +0.4 1,816,105 + SGL_RS10430 0.71 +0.2 1,816,149 + SGL_RS10430 0.76 -0.3 1,816,152 + SGL_RS10430 0.76 +0.4 1,816,159 + SGL_RS10430 0.77 +0.1
Or see this region's nucleotide sequence