Experiment: growth in full media supplemented with 5mM sodum metaarsenite but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02250 and SGL_RS02255 are separated by 117 nucleotides SGL_RS02255 and SGL_RS02260 are separated by 106 nucleotides SGL_RS02260 and SGL_RS02265 are separated by 156 nucleotides
SGL_RS02250: SGL_RS02250 - glycosyltransferase, at 86,159 to 87,418
_RS02250
SGL_RS02255: SGL_RS02255 - sulfite exporter TauE/SafE family protein, at 87,536 to 87,910
_RS02255
SGL_RS02260: SGL_RS02260 - HEAT repeat domain-containing protein, at 88,017 to 88,661
_RS02260
SGL_RS02265: SGL_RS02265 - transglutaminase family protein, at 88,818 to 90,506
_RS02265
Position (kb) 88
89 Strain fitness (log2 ratio) -2
-1
0
1 at 87.102 kb on + strand, within SGL_RS02250 at 87.110 kb on - strand, within SGL_RS02250 at 87.138 kb on - strand, within SGL_RS02250 at 87.138 kb on - strand, within SGL_RS02250 at 87.710 kb on + strand, within SGL_RS02255 at 87.718 kb on - strand, within SGL_RS02255 at 87.754 kb on + strand, within SGL_RS02255 at 87.762 kb on - strand, within SGL_RS02255 at 87.775 kb on - strand, within SGL_RS02255 at 87.823 kb on - strand, within SGL_RS02255 at 87.996 kb on + strand at 87.996 kb on + strand at 88.004 kb on - strand at 88.015 kb on + strand at 88.032 kb on + strand at 88.042 kb on + strand at 88.128 kb on - strand, within SGL_RS02260 at 88.390 kb on + strand, within SGL_RS02260 at 88.398 kb on - strand, within SGL_RS02260 at 88.509 kb on + strand, within SGL_RS02260 at 88.648 kb on + strand at 88.656 kb on - strand at 88.671 kb on + strand at 88.679 kb on - strand at 88.681 kb on + strand at 88.683 kb on + strand at 88.717 kb on + strand at 88.717 kb on + strand at 88.747 kb on - strand at 88.784 kb on - strand at 88.784 kb on - strand at 88.795 kb on + strand at 89.028 kb on - strand, within SGL_RS02265 at 89.098 kb on + strand, within SGL_RS02265 at 89.100 kb on + strand, within SGL_RS02265 at 89.129 kb on + strand, within SGL_RS02265 at 89.130 kb on + strand, within SGL_RS02265 at 89.143 kb on + strand, within SGL_RS02265 at 89.212 kb on - strand, within SGL_RS02265 at 89.304 kb on + strand, within SGL_RS02265 at 89.559 kb on - strand, within SGL_RS02265 at 89.559 kb on - strand, within SGL_RS02265 at 89.575 kb on + strand, within SGL_RS02265 at 89.592 kb on - strand, within SGL_RS02265
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 5mM sodum metaarsenite but diluted to prevent light attenuation remove 87,102 + SGL_RS02250 0.75 -0.4 87,110 - SGL_RS02250 0.75 +0.0 87,138 - SGL_RS02250 0.78 -0.3 87,138 - SGL_RS02250 0.78 +0.1 87,710 + SGL_RS02255 0.46 +0.0 87,718 - SGL_RS02255 0.49 -0.0 87,754 + SGL_RS02255 0.58 -0.6 87,762 - SGL_RS02255 0.60 +0.1 87,775 - SGL_RS02255 0.64 -0.2 87,823 - SGL_RS02255 0.77 -0.1 87,996 + +0.3 87,996 + -0.2 88,004 - -0.0 88,015 + -0.3 88,032 + -0.2 88,042 + -0.5 88,128 - SGL_RS02260 0.17 -0.3 88,390 + SGL_RS02260 0.58 -1.9 88,398 - SGL_RS02260 0.59 -1.6 88,509 + SGL_RS02260 0.76 -1.8 88,648 + -2.0 88,656 - +0.4 88,671 + +0.1 88,679 - +0.9 88,681 + +0.2 88,683 + +0.1 88,717 + +0.4 88,717 + -0.1 88,747 - -0.3 88,784 - -0.1 88,784 - -0.1 88,795 + +0.1 89,028 - SGL_RS02265 0.12 +0.8 89,098 + SGL_RS02265 0.17 +0.3 89,100 + SGL_RS02265 0.17 +0.3 89,129 + SGL_RS02265 0.18 -0.3 89,130 + SGL_RS02265 0.18 +0.1 89,143 + SGL_RS02265 0.19 -0.3 89,212 - SGL_RS02265 0.23 +0.4 89,304 + SGL_RS02265 0.29 +0.5 89,559 - SGL_RS02265 0.44 -0.1 89,559 - SGL_RS02265 0.44 -0.7 89,575 + SGL_RS02265 0.45 +0.3 89,592 - SGL_RS02265 0.46 -0.9
Or see this region's nucleotide sequence