Experiment: growth in full media supplemented with 3 .M Cl2Co
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS17750 and SGL_RS17755 are separated by 126 nucleotides SGL_RS17755 and SGL_RS17760 are separated by 170 nucleotides SGL_RS17760 and SGL_RS17765 are separated by 93 nucleotides
SGL_RS17750: SGL_RS17750 - circadian clock protein KaiA, at 3,433,362 to 3,434,261
_RS17750
SGL_RS17755: SGL_RS17755 - circadian clock protein KaiB, at 3,434,388 to 3,434,705
_RS17755
SGL_RS17760: SGL_RS17760 - circadian clock protein KaiC, at 3,434,876 to 3,436,435
_RS17760
SGL_RS17765: SGL_RS17765 - DUF4114 domain-containing protein, at 3,436,529 to 3,441,844
_RS17765
Position (kb)
3434
3435
3436
3437 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3434.447 kb on - strand, within SGL_RS17755 at 3434.525 kb on - strand, within SGL_RS17755 at 3434.661 kb on - strand, within SGL_RS17755 at 3434.997 kb on + strand at 3435.002 kb on + strand at 3435.010 kb on - strand at 3435.270 kb on + strand, within SGL_RS17760 at 3435.306 kb on + strand, within SGL_RS17760 at 3435.387 kb on + strand, within SGL_RS17760 at 3435.395 kb on - strand, within SGL_RS17760 at 3435.397 kb on + strand, within SGL_RS17760 at 3435.558 kb on + strand, within SGL_RS17760 at 3435.641 kb on + strand, within SGL_RS17760 at 3435.641 kb on + strand, within SGL_RS17760 at 3435.641 kb on + strand, within SGL_RS17760 at 3435.649 kb on - strand, within SGL_RS17760 at 3435.649 kb on - strand, within SGL_RS17760 at 3435.755 kb on + strand, within SGL_RS17760 at 3436.027 kb on + strand, within SGL_RS17760 at 3436.029 kb on + strand, within SGL_RS17760 at 3436.290 kb on + strand at 3436.420 kb on - strand at 3436.420 kb on - strand at 3436.504 kb on - strand at 3436.600 kb on + strand at 3436.606 kb on - strand at 3436.615 kb on + strand at 3436.621 kb on + strand at 3436.629 kb on - strand at 3436.658 kb on + strand at 3436.688 kb on - strand at 3436.699 kb on - strand at 3436.773 kb on + strand at 3436.773 kb on + strand at 3436.781 kb on - strand at 3436.827 kb on - strand at 3436.853 kb on + strand at 3437.144 kb on - strand, within SGL_RS17765 at 3437.162 kb on - strand, within SGL_RS17765 at 3437.212 kb on + strand, within SGL_RS17765 at 3437.212 kb on + strand, within SGL_RS17765 at 3437.346 kb on + strand, within SGL_RS17765
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co remove 3,434,447 - SGL_RS17755 0.19 -0.1 3,434,525 - SGL_RS17755 0.43 -0.1 3,434,661 - SGL_RS17755 0.86 -0.4 3,434,997 + -2.8 3,435,002 + -4.7 3,435,010 - -3.0 3,435,270 + SGL_RS17760 0.25 -2.9 3,435,306 + SGL_RS17760 0.28 -3.5 3,435,387 + SGL_RS17760 0.33 -4.2 3,435,395 - SGL_RS17760 0.33 -3.5 3,435,397 + SGL_RS17760 0.33 -2.2 3,435,558 + SGL_RS17760 0.44 -3.3 3,435,641 + SGL_RS17760 0.49 -3.2 3,435,641 + SGL_RS17760 0.49 -3.5 3,435,641 + SGL_RS17760 0.49 -1.2 3,435,649 - SGL_RS17760 0.50 -4.7 3,435,649 - SGL_RS17760 0.50 -4.0 3,435,755 + SGL_RS17760 0.56 -4.5 3,436,027 + SGL_RS17760 0.74 -3.1 3,436,029 + SGL_RS17760 0.74 -1.9 3,436,290 + -3.1 3,436,420 - -4.5 3,436,420 - -3.5 3,436,504 - +0.5 3,436,600 + +0.2 3,436,606 - +0.6 3,436,615 + +0.6 3,436,621 + +0.1 3,436,629 - -0.8 3,436,658 + -0.1 3,436,688 - +0.2 3,436,699 - -0.1 3,436,773 + +0.1 3,436,773 + +0.5 3,436,781 - +0.4 3,436,827 - -0.1 3,436,853 + +0.7 3,437,144 - SGL_RS17765 0.12 +0.6 3,437,162 - SGL_RS17765 0.12 -0.2 3,437,212 + SGL_RS17765 0.13 +0.2 3,437,212 + SGL_RS17765 0.13 -0.2 3,437,346 + SGL_RS17765 0.15 +0.1
Or see this region's nucleotide sequence