Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS17760

Experiment: growth in full media supplemented with 3 .M Cl2Co

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS17750 and SGL_RS17755 are separated by 126 nucleotidesSGL_RS17755 and SGL_RS17760 are separated by 170 nucleotidesSGL_RS17760 and SGL_RS17765 are separated by 93 nucleotides SGL_RS17750: SGL_RS17750 - circadian clock protein KaiA, at 3,433,362 to 3,434,261 _RS17750 SGL_RS17755: SGL_RS17755 - circadian clock protein KaiB, at 3,434,388 to 3,434,705 _RS17755 SGL_RS17760: SGL_RS17760 - circadian clock protein KaiC, at 3,434,876 to 3,436,435 _RS17760 SGL_RS17765: SGL_RS17765 - DUF4114 domain-containing protein, at 3,436,529 to 3,441,844 _RS17765 Position (kb) 3434 3435 3436 3437Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3434.447 kb on - strand, within SGL_RS17755at 3434.525 kb on - strand, within SGL_RS17755at 3434.661 kb on - strand, within SGL_RS17755at 3434.997 kb on + strandat 3435.002 kb on + strandat 3435.010 kb on - strandat 3435.270 kb on + strand, within SGL_RS17760at 3435.306 kb on + strand, within SGL_RS17760at 3435.387 kb on + strand, within SGL_RS17760at 3435.395 kb on - strand, within SGL_RS17760at 3435.397 kb on + strand, within SGL_RS17760at 3435.558 kb on + strand, within SGL_RS17760at 3435.641 kb on + strand, within SGL_RS17760at 3435.641 kb on + strand, within SGL_RS17760at 3435.641 kb on + strand, within SGL_RS17760at 3435.649 kb on - strand, within SGL_RS17760at 3435.649 kb on - strand, within SGL_RS17760at 3435.755 kb on + strand, within SGL_RS17760at 3436.027 kb on + strand, within SGL_RS17760at 3436.029 kb on + strand, within SGL_RS17760at 3436.290 kb on + strandat 3436.420 kb on - strandat 3436.420 kb on - strandat 3436.504 kb on - strandat 3436.600 kb on + strandat 3436.606 kb on - strandat 3436.615 kb on + strandat 3436.621 kb on + strandat 3436.629 kb on - strandat 3436.658 kb on + strandat 3436.688 kb on - strandat 3436.699 kb on - strandat 3436.773 kb on + strandat 3436.773 kb on + strandat 3436.781 kb on - strandat 3436.827 kb on - strandat 3436.853 kb on + strandat 3437.144 kb on - strand, within SGL_RS17765at 3437.162 kb on - strand, within SGL_RS17765at 3437.212 kb on + strand, within SGL_RS17765at 3437.212 kb on + strand, within SGL_RS17765at 3437.346 kb on + strand, within SGL_RS17765

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co
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3,434,447 - SGL_RS17755 0.19 -0.1
3,434,525 - SGL_RS17755 0.43 -0.1
3,434,661 - SGL_RS17755 0.86 -0.4
3,434,997 + -2.8
3,435,002 + -4.7
3,435,010 - -3.0
3,435,270 + SGL_RS17760 0.25 -2.9
3,435,306 + SGL_RS17760 0.28 -3.5
3,435,387 + SGL_RS17760 0.33 -4.2
3,435,395 - SGL_RS17760 0.33 -3.5
3,435,397 + SGL_RS17760 0.33 -2.2
3,435,558 + SGL_RS17760 0.44 -3.3
3,435,641 + SGL_RS17760 0.49 -3.2
3,435,641 + SGL_RS17760 0.49 -3.5
3,435,641 + SGL_RS17760 0.49 -1.2
3,435,649 - SGL_RS17760 0.50 -4.7
3,435,649 - SGL_RS17760 0.50 -4.0
3,435,755 + SGL_RS17760 0.56 -4.5
3,436,027 + SGL_RS17760 0.74 -3.1
3,436,029 + SGL_RS17760 0.74 -1.9
3,436,290 + -3.1
3,436,420 - -4.5
3,436,420 - -3.5
3,436,504 - +0.5
3,436,600 + +0.2
3,436,606 - +0.6
3,436,615 + +0.6
3,436,621 + +0.1
3,436,629 - -0.8
3,436,658 + -0.1
3,436,688 - +0.2
3,436,699 - -0.1
3,436,773 + +0.1
3,436,773 + +0.5
3,436,781 - +0.4
3,436,827 - -0.1
3,436,853 + +0.7
3,437,144 - SGL_RS17765 0.12 +0.6
3,437,162 - SGL_RS17765 0.12 -0.2
3,437,212 + SGL_RS17765 0.13 +0.2
3,437,212 + SGL_RS17765 0.13 -0.2
3,437,346 + SGL_RS17765 0.15 +0.1

Or see this region's nucleotide sequence