Experiment: growth in full media supplemented with 3 .M Cl2Co
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS17680 and SGL_RS17685 are separated by 549 nucleotides SGL_RS17685 and SGL_RS17690 are separated by 12 nucleotides SGL_RS17690 and SGL_RS17695 are separated by 18 nucleotides
SGL_RS17680: SGL_RS17680 - hypothetical protein, at 3,421,907 to 3,422,482
_RS17680
SGL_RS17685: SGL_RS17685 - ArsB/NhaD family transporter, at 3,423,032 to 3,424,381
_RS17685
SGL_RS17690: SGL_RS17690 - hypothetical protein, at 3,424,394 to 3,424,648
_RS17690
SGL_RS17695: SGL_RS17695 - DNA adenine methylase, at 3,424,667 to 3,425,524
_RS17695
Position (kb)
3423
3424
3425 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3422.237 kb on - strand, within SGL_RS17680 at 3423.194 kb on + strand, within SGL_RS17685 at 3423.202 kb on - strand, within SGL_RS17685 at 3423.333 kb on + strand, within SGL_RS17685 at 3423.333 kb on + strand, within SGL_RS17685 at 3423.399 kb on - strand, within SGL_RS17685 at 3423.410 kb on - strand, within SGL_RS17685 at 3423.705 kb on - strand, within SGL_RS17685 at 3423.830 kb on - strand, within SGL_RS17685 at 3423.830 kb on - strand, within SGL_RS17685 at 3423.990 kb on + strand, within SGL_RS17685 at 3424.083 kb on + strand, within SGL_RS17685 at 3424.091 kb on - strand, within SGL_RS17685 at 3424.204 kb on - strand, within SGL_RS17685 at 3424.364 kb on - strand at 3424.520 kb on + strand, within SGL_RS17690 at 3424.625 kb on + strand at 3424.858 kb on + strand, within SGL_RS17695
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co remove 3,422,237 - SGL_RS17680 0.57 +0.3 3,423,194 + SGL_RS17685 0.12 -1.7 3,423,202 - SGL_RS17685 0.13 -1.4 3,423,333 + SGL_RS17685 0.22 -1.2 3,423,333 + SGL_RS17685 0.22 -1.1 3,423,399 - SGL_RS17685 0.27 -0.6 3,423,410 - SGL_RS17685 0.28 -1.2 3,423,705 - SGL_RS17685 0.50 -1.6 3,423,830 - SGL_RS17685 0.59 -0.1 3,423,830 - SGL_RS17685 0.59 -1.0 3,423,990 + SGL_RS17685 0.71 -1.2 3,424,083 + SGL_RS17685 0.78 -1.3 3,424,091 - SGL_RS17685 0.78 -0.5 3,424,204 - SGL_RS17685 0.87 -0.7 3,424,364 - +0.5 3,424,520 + SGL_RS17690 0.49 +0.1 3,424,625 + -0.9 3,424,858 + SGL_RS17695 0.22 -3.1
Or see this region's nucleotide sequence