Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS15345

Experiment: growth in full media supplemented with 3 .M Cl2Co

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS15340 and SGL_RS15345 are separated by 166 nucleotidesSGL_RS15345 and SGL_RS15350 are separated by 151 nucleotides SGL_RS15340: SGL_RS15340 - Hsp70 family protein, at 2,893,184 to 2,894,779 _RS15340 SGL_RS15345: SGL_RS15345 - FAD-dependent oxidoreductase, at 2,894,946 to 2,896,574 _RS15345 SGL_RS15350: SGL_RS15350 - methyltransferase domain-containing protein, at 2,896,726 to 2,897,610 _RS15350 Position (kb) 2894 2895 2896 2897Strain fitness (log2 ratio) -2 -1 0 1at 2894.028 kb on - strand, within SGL_RS15340at 2894.028 kb on - strand, within SGL_RS15340at 2894.148 kb on + strand, within SGL_RS15340at 2894.156 kb on - strand, within SGL_RS15340at 2894.158 kb on - strand, within SGL_RS15340at 2894.180 kb on - strand, within SGL_RS15340at 2894.225 kb on + strand, within SGL_RS15340at 2894.228 kb on - strand, within SGL_RS15340at 2894.330 kb on - strand, within SGL_RS15340at 2894.366 kb on - strand, within SGL_RS15340at 2894.378 kb on - strand, within SGL_RS15340at 2894.443 kb on - strand, within SGL_RS15340at 2894.456 kb on - strand, within SGL_RS15340at 2894.492 kb on - strand, within SGL_RS15340at 2894.988 kb on + strandat 2894.988 kb on + strandat 2894.988 kb on + strandat 2895.054 kb on + strandat 2895.293 kb on + strand, within SGL_RS15345at 2895.348 kb on + strand, within SGL_RS15345at 2895.413 kb on + strand, within SGL_RS15345at 2895.542 kb on + strand, within SGL_RS15345at 2895.550 kb on - strand, within SGL_RS15345at 2895.550 kb on - strand, within SGL_RS15345at 2895.550 kb on - strand, within SGL_RS15345at 2895.552 kb on + strand, within SGL_RS15345at 2895.552 kb on + strand, within SGL_RS15345at 2895.678 kb on - strand, within SGL_RS15345at 2895.710 kb on - strand, within SGL_RS15345at 2895.806 kb on - strand, within SGL_RS15345at 2895.806 kb on - strand, within SGL_RS15345at 2895.811 kb on - strand, within SGL_RS15345at 2896.128 kb on + strand, within SGL_RS15345at 2896.136 kb on - strand, within SGL_RS15345at 2896.136 kb on - strand, within SGL_RS15345at 2896.218 kb on + strand, within SGL_RS15345at 2896.591 kb on - strandat 2896.591 kb on - strandat 2896.726 kb on - strandat 2896.748 kb on + strandat 2896.756 kb on - strandat 2896.828 kb on - strand, within SGL_RS15350at 2896.848 kb on + strand, within SGL_RS15350at 2896.929 kb on - strand, within SGL_RS15350at 2897.001 kb on - strand, within SGL_RS15350at 2897.066 kb on - strand, within SGL_RS15350at 2897.071 kb on + strand, within SGL_RS15350at 2897.071 kb on + strand, within SGL_RS15350at 2897.071 kb on + strand, within SGL_RS15350at 2897.079 kb on - strand, within SGL_RS15350at 2897.079 kb on - strand, within SGL_RS15350at 2897.091 kb on - strand, within SGL_RS15350at 2897.150 kb on + strand, within SGL_RS15350at 2897.160 kb on + strand, within SGL_RS15350at 2897.286 kb on + strand, within SGL_RS15350at 2897.332 kb on - strand, within SGL_RS15350at 2897.489 kb on - strand, within SGL_RS15350at 2897.489 kb on - strand, within SGL_RS15350

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co
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2,894,028 - SGL_RS15340 0.53 -0.3
2,894,028 - SGL_RS15340 0.53 -0.3
2,894,148 + SGL_RS15340 0.60 -0.5
2,894,156 - SGL_RS15340 0.61 -0.6
2,894,158 - SGL_RS15340 0.61 -0.1
2,894,180 - SGL_RS15340 0.62 +0.2
2,894,225 + SGL_RS15340 0.65 +0.2
2,894,228 - SGL_RS15340 0.65 -0.4
2,894,330 - SGL_RS15340 0.72 +0.2
2,894,366 - SGL_RS15340 0.74 -0.2
2,894,378 - SGL_RS15340 0.75 -0.5
2,894,443 - SGL_RS15340 0.79 +0.1
2,894,456 - SGL_RS15340 0.80 +1.5
2,894,492 - SGL_RS15340 0.82 -0.2
2,894,988 + -0.8
2,894,988 + -1.8
2,894,988 + -1.4
2,895,054 + -2.6
2,895,293 + SGL_RS15345 0.21 -1.8
2,895,348 + SGL_RS15345 0.25 -1.8
2,895,413 + SGL_RS15345 0.29 -1.0
2,895,542 + SGL_RS15345 0.37 -2.5
2,895,550 - SGL_RS15345 0.37 -1.2
2,895,550 - SGL_RS15345 0.37 -2.0
2,895,550 - SGL_RS15345 0.37 -1.6
2,895,552 + SGL_RS15345 0.37 -2.4
2,895,552 + SGL_RS15345 0.37 -0.2
2,895,678 - SGL_RS15345 0.45 -2.4
2,895,710 - SGL_RS15345 0.47 -2.6
2,895,806 - SGL_RS15345 0.53 -1.2
2,895,806 - SGL_RS15345 0.53 -2.1
2,895,811 - SGL_RS15345 0.53 -2.7
2,896,128 + SGL_RS15345 0.73 -1.6
2,896,136 - SGL_RS15345 0.73 -1.9
2,896,136 - SGL_RS15345 0.73 -1.9
2,896,218 + SGL_RS15345 0.78 -2.4
2,896,591 - +0.9
2,896,591 - +0.3
2,896,726 - +0.3
2,896,748 + +0.9
2,896,756 - +0.4
2,896,828 - SGL_RS15350 0.12 +0.0
2,896,848 + SGL_RS15350 0.14 +0.5
2,896,929 - SGL_RS15350 0.23 -0.2
2,897,001 - SGL_RS15350 0.31 -0.6
2,897,066 - SGL_RS15350 0.38 -0.3
2,897,071 + SGL_RS15350 0.39 +1.1
2,897,071 + SGL_RS15350 0.39 +0.3
2,897,071 + SGL_RS15350 0.39 +0.4
2,897,079 - SGL_RS15350 0.40 +0.4
2,897,079 - SGL_RS15350 0.40 +1.2
2,897,091 - SGL_RS15350 0.41 -1.5
2,897,150 + SGL_RS15350 0.48 +1.2
2,897,160 + SGL_RS15350 0.49 +0.4
2,897,286 + SGL_RS15350 0.63 -0.3
2,897,332 - SGL_RS15350 0.68 +0.4
2,897,489 - SGL_RS15350 0.86 +0.1
2,897,489 - SGL_RS15350 0.86 -0.1

Or see this region's nucleotide sequence