Experiment: growth in full media supplemented with 3 .M Cl2Co
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS13565 and SGL_RS13570 are separated by 175 nucleotides SGL_RS13570 and SGL_RS13575 are separated by 0 nucleotides SGL_RS13575 and SGL_RS13580 are separated by 64 nucleotides
SGL_RS13565: SGL_RS13565 - glycine--tRNA ligase subunit beta, at 2,513,806 to 2,515,974
_RS13565
SGL_RS13570: SGL_RS13570 - type II toxin-antitoxin system VapC family toxin, at 2,516,150 to 2,516,527
_RS13570
SGL_RS13575: SGL_RS13575 - DUF2281 domain-containing protein, at 2,516,528 to 2,516,749
_RS13575
SGL_RS13580: SGL_RS13580 - FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO, at 2,516,814 to 2,518,184
_RS13580
Position (kb) 2516
2517 Strain fitness (log2 ratio) -1
0
1 at 2516.107 kb on + strand at 2516.254 kb on - strand, within SGL_RS13570 at 2516.703 kb on + strand, within SGL_RS13575 at 2516.781 kb on + strand at 2516.877 kb on - strand at 2517.015 kb on - strand, within SGL_RS13580 at 2517.063 kb on + strand, within SGL_RS13580 at 2517.105 kb on + strand, within SGL_RS13580 at 2517.121 kb on + strand, within SGL_RS13580 at 2517.215 kb on + strand, within SGL_RS13580 at 2517.231 kb on + strand, within SGL_RS13580 at 2517.281 kb on + strand, within SGL_RS13580 at 2517.420 kb on + strand, within SGL_RS13580 at 2517.433 kb on + strand, within SGL_RS13580 at 2517.441 kb on - strand, within SGL_RS13580 at 2517.561 kb on - strand, within SGL_RS13580 at 2517.691 kb on - strand, within SGL_RS13580
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co remove 2,516,107 + +0.4 2,516,254 - SGL_RS13570 0.28 +0.1 2,516,703 + SGL_RS13575 0.79 -1.1 2,516,781 + +0.4 2,516,877 - +0.2 2,517,015 - SGL_RS13580 0.15 +0.1 2,517,063 + SGL_RS13580 0.18 -0.0 2,517,105 + SGL_RS13580 0.21 +0.3 2,517,121 + SGL_RS13580 0.22 -0.4 2,517,215 + SGL_RS13580 0.29 +0.3 2,517,231 + SGL_RS13580 0.30 +0.2 2,517,281 + SGL_RS13580 0.34 -0.2 2,517,420 + SGL_RS13580 0.44 +0.6 2,517,433 + SGL_RS13580 0.45 +0.1 2,517,441 - SGL_RS13580 0.46 +1.2 2,517,561 - SGL_RS13580 0.54 +0.1 2,517,691 - SGL_RS13580 0.64 -0.1
Or see this region's nucleotide sequence