Experiment: growth in full media supplemented with 3 .M Cl2Co
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS13165 and SGL_RS13170 are separated by 90 nucleotides SGL_RS13170 and SGL_RS13175 are separated by 145 nucleotides SGL_RS13175 and SGL_RS13180 are separated by 200 nucleotides
SGL_RS13165: SGL_RS13165 - flavin monoamine oxidase family protein, at 2,420,030 to 2,421,445
_RS13165
SGL_RS13170: SGL_RS13170 - histidine kinase, at 2,421,536 to 2,422,687
_RS13170
SGL_RS13175: SGL_RS13175 - GerMN domain-containing protein, at 2,422,833 to 2,423,420
_RS13175
SGL_RS13180: SGL_RS13180 - triose-phosphate isomerase, at 2,423,621 to 2,424,349
_RS13180
Position (kb)
2421
2422
2423 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2420.537 kb on + strand, within SGL_RS13165 at 2420.608 kb on + strand, within SGL_RS13165 at 2420.727 kb on - strand, within SGL_RS13165 at 2420.795 kb on + strand, within SGL_RS13165 at 2420.803 kb on - strand, within SGL_RS13165 at 2420.810 kb on - strand, within SGL_RS13165 at 2420.823 kb on + strand, within SGL_RS13165 at 2420.946 kb on + strand, within SGL_RS13165 at 2421.017 kb on + strand, within SGL_RS13165 at 2421.037 kb on + strand, within SGL_RS13165 at 2421.045 kb on - strand, within SGL_RS13165 at 2421.082 kb on + strand, within SGL_RS13165 at 2421.096 kb on + strand, within SGL_RS13165 at 2421.171 kb on - strand, within SGL_RS13165 at 2421.320 kb on - strand at 2421.327 kb on + strand at 2421.447 kb on - strand at 2421.484 kb on + strand at 2421.643 kb on + strand at 2421.672 kb on + strand, within SGL_RS13170 at 2421.679 kb on + strand, within SGL_RS13170 at 2422.181 kb on - strand, within SGL_RS13170 at 2422.183 kb on - strand, within SGL_RS13170 at 2422.207 kb on - strand, within SGL_RS13170 at 2422.231 kb on + strand, within SGL_RS13170 at 2422.609 kb on - strand at 2422.727 kb on + strand at 2422.762 kb on + strand at 2422.804 kb on - strand at 2422.917 kb on + strand, within SGL_RS13175 at 2423.019 kb on + strand, within SGL_RS13175 at 2423.048 kb on + strand, within SGL_RS13175 at 2423.090 kb on - strand, within SGL_RS13175 at 2423.326 kb on - strand, within SGL_RS13175 at 2423.381 kb on - strand at 2423.562 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co remove 2,420,537 + SGL_RS13165 0.36 +0.1 2,420,608 + SGL_RS13165 0.41 +0.1 2,420,727 - SGL_RS13165 0.49 +0.0 2,420,795 + SGL_RS13165 0.54 +1.0 2,420,803 - SGL_RS13165 0.55 +0.8 2,420,810 - SGL_RS13165 0.55 -0.6 2,420,823 + SGL_RS13165 0.56 -0.5 2,420,946 + SGL_RS13165 0.65 -0.1 2,421,017 + SGL_RS13165 0.70 -0.5 2,421,037 + SGL_RS13165 0.71 +0.3 2,421,045 - SGL_RS13165 0.72 -0.2 2,421,082 + SGL_RS13165 0.74 -0.1 2,421,096 + SGL_RS13165 0.75 +0.3 2,421,171 - SGL_RS13165 0.81 -0.5 2,421,320 - -0.0 2,421,327 + +0.0 2,421,447 - -0.7 2,421,484 + -0.1 2,421,643 + -2.0 2,421,672 + SGL_RS13170 0.12 -3.5 2,421,679 + SGL_RS13170 0.12 -3.2 2,422,181 - SGL_RS13170 0.56 -4.1 2,422,183 - SGL_RS13170 0.56 -3.0 2,422,207 - SGL_RS13170 0.58 -2.0 2,422,231 + SGL_RS13170 0.60 -2.7 2,422,609 - -2.6 2,422,727 + -4.8 2,422,762 + -4.9 2,422,804 - -3.2 2,422,917 + SGL_RS13175 0.14 +0.6 2,423,019 + SGL_RS13175 0.32 +0.3 2,423,048 + SGL_RS13175 0.37 -0.6 2,423,090 - SGL_RS13175 0.44 -0.7 2,423,326 - SGL_RS13175 0.84 -0.2 2,423,381 - +0.0 2,423,562 - -0.1
Or see this region's nucleotide sequence