Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS12930

Experiment: growth in full media supplemented with 3 .M Cl2Co

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS12925 and SGL_RS12930 are separated by 132 nucleotidesSGL_RS12930 and SGL_RS12935 are separated by 181 nucleotides SGL_RS12925: SGL_RS12925 - AAA family ATPase, at 2,375,539 to 2,377,044 _RS12925 SGL_RS12930: SGL_RS12930 - DUF1257 domain-containing protein, at 2,377,177 to 2,377,527 _RS12930 SGL_RS12935: SGL_RS12935 - hypothetical protein, at 2,377,709 to 2,378,938 _RS12935 Position (kb) 2377 2378Strain fitness (log2 ratio) -3 -2 -1 0 1at 2376.212 kb on - strand, within SGL_RS12925at 2376.221 kb on + strand, within SGL_RS12925at 2376.317 kb on - strand, within SGL_RS12925at 2376.417 kb on + strand, within SGL_RS12925at 2376.428 kb on + strand, within SGL_RS12925at 2376.519 kb on + strand, within SGL_RS12925at 2376.854 kb on - strand, within SGL_RS12925at 2376.931 kb on - strandat 2376.947 kb on + strandat 2376.955 kb on - strandat 2376.957 kb on - strandat 2377.389 kb on + strand, within SGL_RS12930at 2377.397 kb on - strand, within SGL_RS12930at 2377.397 kb on - strand, within SGL_RS12930at 2377.475 kb on + strand, within SGL_RS12930at 2377.574 kb on + strandat 2377.616 kb on + strandat 2377.732 kb on + strandat 2377.735 kb on - strandat 2377.740 kb on - strandat 2377.757 kb on - strandat 2377.992 kb on - strand, within SGL_RS12935at 2378.030 kb on - strand, within SGL_RS12935at 2378.111 kb on + strand, within SGL_RS12935at 2378.159 kb on + strand, within SGL_RS12935at 2378.159 kb on + strand, within SGL_RS12935at 2378.272 kb on + strand, within SGL_RS12935at 2378.280 kb on - strand, within SGL_RS12935at 2378.391 kb on - strand, within SGL_RS12935at 2378.467 kb on - strand, within SGL_RS12935at 2378.469 kb on + strand, within SGL_RS12935

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co
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2,376,212 - SGL_RS12925 0.45 -2.1
2,376,221 + SGL_RS12925 0.45 -3.0
2,376,317 - SGL_RS12925 0.52 -1.8
2,376,417 + SGL_RS12925 0.58 -1.6
2,376,428 + SGL_RS12925 0.59 -0.4
2,376,519 + SGL_RS12925 0.65 -1.8
2,376,854 - SGL_RS12925 0.87 -2.0
2,376,931 - -3.4
2,376,947 + -1.3
2,376,955 - -3.1
2,376,957 - -3.3
2,377,389 + SGL_RS12930 0.60 -2.1
2,377,397 - SGL_RS12930 0.63 -0.8
2,377,397 - SGL_RS12930 0.63 -1.8
2,377,475 + SGL_RS12930 0.85 -1.3
2,377,574 + +0.3
2,377,616 + -0.3
2,377,732 + -0.0
2,377,735 - +0.4
2,377,740 - -0.0
2,377,757 - +0.2
2,377,992 - SGL_RS12935 0.23 -0.1
2,378,030 - SGL_RS12935 0.26 +0.3
2,378,111 + SGL_RS12935 0.33 -0.4
2,378,159 + SGL_RS12935 0.37 -0.0
2,378,159 + SGL_RS12935 0.37 -0.0
2,378,272 + SGL_RS12935 0.46 +0.0
2,378,280 - SGL_RS12935 0.46 -0.0
2,378,391 - SGL_RS12935 0.55 -0.4
2,378,467 - SGL_RS12935 0.62 +0.3
2,378,469 + SGL_RS12935 0.62 -0.2

Or see this region's nucleotide sequence