Experiment: growth in full media supplemented with 3 .M Cl2Co
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS12915 and SGL_RS12920 are separated by 279 nucleotides SGL_RS12920 and SGL_RS12925 are separated by 90 nucleotides SGL_RS12925 and SGL_RS12930 are separated by 132 nucleotides SGL_RS12930 and SGL_RS12935 are separated by 181 nucleotides
SGL_RS12915: SGL_RS12915 - circularly permuted type 2 ATP-grasp protein, at 2,373,343 to 2,374,788
_RS12915
SGL_RS12920: SGL_RS12920 - hypothetical protein, at 2,375,068 to 2,375,448
_RS12920
SGL_RS12925: SGL_RS12925 - AAA family ATPase, at 2,375,539 to 2,377,044
_RS12925
SGL_RS12930: SGL_RS12930 - DUF1257 domain-containing protein, at 2,377,177 to 2,377,527
_RS12930
SGL_RS12935: SGL_RS12935 - hypothetical protein, at 2,377,709 to 2,378,938
_RS12935
Position (kb)
2375
2376
2377
2378 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2374.557 kb on + strand, within SGL_RS12915 at 2374.582 kb on + strand, within SGL_RS12915 at 2374.718 kb on + strand at 2374.736 kb on - strand at 2374.812 kb on + strand at 2374.891 kb on + strand at 2374.893 kb on - strand at 2374.893 kb on - strand at 2375.133 kb on - strand, within SGL_RS12920 at 2375.135 kb on + strand, within SGL_RS12920 at 2375.163 kb on + strand, within SGL_RS12920 at 2375.177 kb on - strand, within SGL_RS12920 at 2375.465 kb on - strand at 2375.547 kb on - strand at 2375.555 kb on + strand at 2375.577 kb on - strand at 2375.705 kb on + strand, within SGL_RS12925 at 2375.730 kb on + strand, within SGL_RS12925 at 2375.735 kb on - strand, within SGL_RS12925 at 2375.861 kb on + strand, within SGL_RS12925 at 2375.966 kb on - strand, within SGL_RS12925 at 2375.991 kb on - strand, within SGL_RS12925 at 2375.997 kb on - strand, within SGL_RS12925 at 2376.045 kb on + strand, within SGL_RS12925 at 2376.053 kb on - strand, within SGL_RS12925 at 2376.108 kb on - strand, within SGL_RS12925 at 2376.212 kb on - strand, within SGL_RS12925 at 2376.221 kb on + strand, within SGL_RS12925 at 2376.317 kb on - strand, within SGL_RS12925 at 2376.417 kb on + strand, within SGL_RS12925 at 2376.428 kb on + strand, within SGL_RS12925 at 2376.519 kb on + strand, within SGL_RS12925 at 2376.854 kb on - strand, within SGL_RS12925 at 2376.931 kb on - strand at 2376.947 kb on + strand at 2376.955 kb on - strand at 2376.957 kb on - strand at 2377.389 kb on + strand, within SGL_RS12930 at 2377.397 kb on - strand, within SGL_RS12930 at 2377.397 kb on - strand, within SGL_RS12930 at 2377.475 kb on + strand, within SGL_RS12930 at 2377.574 kb on + strand at 2377.616 kb on + strand at 2377.732 kb on + strand at 2377.735 kb on - strand at 2377.740 kb on - strand at 2377.757 kb on - strand at 2377.992 kb on - strand, within SGL_RS12935 at 2378.030 kb on - strand, within SGL_RS12935
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co remove 2,374,557 + SGL_RS12915 0.84 -0.5 2,374,582 + SGL_RS12915 0.86 -0.7 2,374,718 + -0.1 2,374,736 - -0.6 2,374,812 + +0.1 2,374,891 + -0.3 2,374,893 - -0.2 2,374,893 - -1.3 2,375,133 - SGL_RS12920 0.17 -1.8 2,375,135 + SGL_RS12920 0.18 -0.3 2,375,163 + SGL_RS12920 0.25 -0.8 2,375,177 - SGL_RS12920 0.29 -1.6 2,375,465 - -4.1 2,375,547 - -0.3 2,375,555 + +0.7 2,375,577 - -2.6 2,375,705 + SGL_RS12925 0.11 -0.6 2,375,730 + SGL_RS12925 0.13 +0.7 2,375,735 - SGL_RS12925 0.13 -2.6 2,375,861 + SGL_RS12925 0.21 -0.8 2,375,966 - SGL_RS12925 0.28 -2.4 2,375,991 - SGL_RS12925 0.30 -0.3 2,375,997 - SGL_RS12925 0.30 -1.1 2,376,045 + SGL_RS12925 0.34 -0.8 2,376,053 - SGL_RS12925 0.34 -0.8 2,376,108 - SGL_RS12925 0.38 -1.1 2,376,212 - SGL_RS12925 0.45 -2.1 2,376,221 + SGL_RS12925 0.45 -3.0 2,376,317 - SGL_RS12925 0.52 -1.8 2,376,417 + SGL_RS12925 0.58 -1.6 2,376,428 + SGL_RS12925 0.59 -0.4 2,376,519 + SGL_RS12925 0.65 -1.8 2,376,854 - SGL_RS12925 0.87 -2.0 2,376,931 - -3.4 2,376,947 + -1.3 2,376,955 - -3.1 2,376,957 - -3.3 2,377,389 + SGL_RS12930 0.60 -2.1 2,377,397 - SGL_RS12930 0.63 -0.8 2,377,397 - SGL_RS12930 0.63 -1.8 2,377,475 + SGL_RS12930 0.85 -1.3 2,377,574 + +0.3 2,377,616 + -0.3 2,377,732 + -0.0 2,377,735 - +0.4 2,377,740 - -0.0 2,377,757 - +0.2 2,377,992 - SGL_RS12935 0.23 -0.1 2,378,030 - SGL_RS12935 0.26 +0.3
Or see this region's nucleotide sequence