Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS12785

Experiment: growth in full media supplemented with 3 .M Cl2Co

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS12775 and SGL_RS12785 are separated by 408 nucleotidesSGL_RS12785 and SGL_RS12790 are separated by 234 nucleotides SGL_RS12775: SGL_RS12775 - hypothetical protein, at 2,319,555 to 2,324,636 _RS12775 SGL_RS12785: SGL_RS12785 - TIGR04376 family protein, at 2,325,045 to 2,325,629 _RS12785 SGL_RS12790: SGL_RS12790 - dynamin-like GTPase family protein, at 2,325,864 to 2,326,937 _RS12790 Position (kb) 2325 2326Strain fitness (log2 ratio) -2 -1 0 1at 2324.145 kb on - strandat 2324.174 kb on + strandat 2324.190 kb on - strandat 2324.197 kb on - strandat 2324.216 kb on + strandat 2324.216 kb on + strandat 2324.309 kb on + strandat 2324.396 kb on + strandat 2324.404 kb on - strandat 2324.442 kb on - strandat 2324.442 kb on - strandat 2324.539 kb on + strandat 2324.944 kb on - strandat 2325.005 kb on - strandat 2325.138 kb on + strand, within SGL_RS12785at 2325.148 kb on + strand, within SGL_RS12785at 2325.156 kb on - strand, within SGL_RS12785at 2325.313 kb on - strand, within SGL_RS12785at 2325.369 kb on + strand, within SGL_RS12785at 2325.532 kb on + strand, within SGL_RS12785at 2325.533 kb on + strand, within SGL_RS12785at 2325.572 kb on + strandat 2325.705 kb on + strandat 2325.830 kb on + strandat 2325.838 kb on - strandat 2326.025 kb on - strand, within SGL_RS12790at 2326.217 kb on - strand, within SGL_RS12790at 2326.233 kb on + strand, within SGL_RS12790at 2326.241 kb on - strand, within SGL_RS12790

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co
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2,324,145 - -0.3
2,324,174 + +0.4
2,324,190 - +0.3
2,324,197 - +0.6
2,324,216 + +0.4
2,324,216 + +0.6
2,324,309 + -0.3
2,324,396 + -0.3
2,324,404 - -0.1
2,324,442 - -0.6
2,324,442 - +0.1
2,324,539 + +0.2
2,324,944 - -0.3
2,325,005 - -0.3
2,325,138 + SGL_RS12785 0.16 -1.4
2,325,148 + SGL_RS12785 0.18 -1.6
2,325,156 - SGL_RS12785 0.19 -0.9
2,325,313 - SGL_RS12785 0.46 -0.3
2,325,369 + SGL_RS12785 0.55 -2.4
2,325,532 + SGL_RS12785 0.83 -1.1
2,325,533 + SGL_RS12785 0.83 -1.8
2,325,572 + -2.1
2,325,705 + -0.1
2,325,830 + -0.6
2,325,838 - -0.2
2,326,025 - SGL_RS12790 0.15 +0.1
2,326,217 - SGL_RS12790 0.33 +0.4
2,326,233 + SGL_RS12790 0.34 -1.2
2,326,241 - SGL_RS12790 0.35 -0.2

Or see this region's nucleotide sequence