Experiment: growth in full media supplemented with 3 .M Cl2Co
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11905 and SGL_RS11910 overlap by 4 nucleotides SGL_RS11910 and SGL_RS11915 are separated by 289 nucleotides SGL_RS11915 and SGL_RS11920 are separated by 40 nucleotides
SGL_RS11905: SGL_RS11905 - hypothetical protein, at 2,124,966 to 2,126,246
_RS11905
SGL_RS11910: SGL_RS11910 - hemolysin family protein, at 2,126,243 to 2,127,589
_RS11910
SGL_RS11915: SGL_RS11915 - 30S ribosomal protein S16, at 2,127,879 to 2,128,127
_RS11915
SGL_RS11920: SGL_RS11920 - KH domain-containing protein, at 2,128,168 to 2,128,524
_RS11920
Position (kb)
2126
2127
2128 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2126.520 kb on - strand, within SGL_RS11910 at 2126.678 kb on + strand, within SGL_RS11910 at 2126.686 kb on + strand, within SGL_RS11910 at 2126.694 kb on - strand, within SGL_RS11910 at 2126.809 kb on + strand, within SGL_RS11910 at 2126.817 kb on - strand, within SGL_RS11910 at 2126.819 kb on + strand, within SGL_RS11910 at 2126.852 kb on + strand, within SGL_RS11910 at 2127.002 kb on + strand, within SGL_RS11910 at 2127.002 kb on + strand, within SGL_RS11910 at 2127.073 kb on + strand, within SGL_RS11910 at 2127.144 kb on + strand, within SGL_RS11910 at 2127.156 kb on + strand, within SGL_RS11910 at 2127.199 kb on - strand, within SGL_RS11910 at 2127.384 kb on - strand, within SGL_RS11910 at 2127.482 kb on + strand at 2127.644 kb on + strand at 2127.739 kb on + strand at 2128.156 kb on + strand at 2128.182 kb on - strand at 2128.441 kb on + strand, within SGL_RS11920 at 2128.449 kb on - strand, within SGL_RS11920 at 2128.496 kb on + strand at 2128.496 kb on + strand at 2128.533 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co remove 2,126,520 - SGL_RS11910 0.21 -2.4 2,126,678 + SGL_RS11910 0.32 -3.0 2,126,686 + SGL_RS11910 0.33 -2.4 2,126,694 - SGL_RS11910 0.33 -1.9 2,126,809 + SGL_RS11910 0.42 -2.4 2,126,817 - SGL_RS11910 0.43 -2.2 2,126,819 + SGL_RS11910 0.43 -2.3 2,126,852 + SGL_RS11910 0.45 +0.0 2,127,002 + SGL_RS11910 0.56 +0.0 2,127,002 + SGL_RS11910 0.56 +0.8 2,127,073 + SGL_RS11910 0.62 -0.8 2,127,144 + SGL_RS11910 0.67 -0.8 2,127,156 + SGL_RS11910 0.68 -3.6 2,127,199 - SGL_RS11910 0.71 -2.4 2,127,384 - SGL_RS11910 0.85 -1.4 2,127,482 + -0.6 2,127,644 + -0.2 2,127,739 + -0.8 2,128,156 + -1.5 2,128,182 - -0.1 2,128,441 + SGL_RS11920 0.76 -1.5 2,128,449 - SGL_RS11920 0.79 -1.2 2,128,496 + -0.5 2,128,496 + +0.8 2,128,533 - +0.0
Or see this region's nucleotide sequence