Experiment: growth in full media supplemented with 3 .M Cl2Co
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS10335 and SGL_RS10340 are separated by 255 nucleotides SGL_RS10340 and SGL_RS10345 are separated by 93 nucleotides SGL_RS10345 and SGL_RS10350 are separated by 213 nucleotides
SGL_RS10335: SGL_RS10335 - tetratricopeptide repeat protein, at 1,792,784 to 1,793,596
_RS10335
SGL_RS10340: SGL_RS10340 - AGE family epimerase/isomerase, at 1,793,852 to 1,795,027
_RS10340
SGL_RS10345: SGL_RS10345 - secondary thiamine-phosphate synthase enzyme YjbQ, at 1,795,121 to 1,795,564
_RS10345
SGL_RS10350: SGL_RS10350 - DUF3685 domain-containing protein, at 1,795,778 to 1,797,466
_RS10350
Position (kb)
1793
1794
1795
1796 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1792.877 kb on + strand, within SGL_RS10335 at 1792.884 kb on + strand, within SGL_RS10335 at 1792.897 kb on - strand, within SGL_RS10335 at 1792.901 kb on + strand, within SGL_RS10335 at 1792.902 kb on - strand, within SGL_RS10335 at 1792.971 kb on + strand, within SGL_RS10335 at 1793.099 kb on + strand, within SGL_RS10335 at 1793.116 kb on - strand, within SGL_RS10335 at 1793.249 kb on + strand, within SGL_RS10335 at 1793.249 kb on + strand, within SGL_RS10335 at 1793.264 kb on - strand, within SGL_RS10335 at 1793.313 kb on - strand, within SGL_RS10335 at 1793.319 kb on - strand, within SGL_RS10335 at 1793.483 kb on + strand, within SGL_RS10335 at 1793.488 kb on + strand, within SGL_RS10335 at 1793.491 kb on - strand, within SGL_RS10335 at 1793.501 kb on + strand, within SGL_RS10335 at 1793.509 kb on - strand, within SGL_RS10335 at 1793.509 kb on - strand, within SGL_RS10335 at 1793.513 kb on + strand, within SGL_RS10335 at 1793.521 kb on - strand at 1793.526 kb on - strand at 1793.539 kb on + strand at 1793.898 kb on + strand at 1793.906 kb on - strand at 1794.032 kb on + strand, within SGL_RS10340 at 1794.184 kb on - strand, within SGL_RS10340 at 1794.233 kb on + strand, within SGL_RS10340 at 1794.241 kb on - strand, within SGL_RS10340 at 1794.323 kb on + strand, within SGL_RS10340 at 1794.348 kb on + strand, within SGL_RS10340 at 1794.356 kb on - strand, within SGL_RS10340 at 1794.401 kb on - strand, within SGL_RS10340 at 1794.432 kb on - strand, within SGL_RS10340 at 1794.442 kb on + strand, within SGL_RS10340 at 1794.470 kb on - strand, within SGL_RS10340 at 1794.512 kb on + strand, within SGL_RS10340 at 1794.564 kb on + strand, within SGL_RS10340 at 1794.572 kb on - strand, within SGL_RS10340 at 1794.584 kb on - strand, within SGL_RS10340 at 1794.584 kb on - strand, within SGL_RS10340 at 1794.621 kb on + strand, within SGL_RS10340 at 1794.664 kb on - strand, within SGL_RS10340 at 1794.768 kb on - strand, within SGL_RS10340 at 1794.797 kb on + strand, within SGL_RS10340 at 1794.947 kb on - strand at 1794.986 kb on + strand at 1794.994 kb on - strand at 1795.253 kb on + strand, within SGL_RS10345 at 1795.261 kb on - strand, within SGL_RS10345 at 1795.430 kb on + strand, within SGL_RS10345
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co remove 1,792,877 + SGL_RS10335 0.11 +0.4 1,792,884 + SGL_RS10335 0.12 -0.2 1,792,897 - SGL_RS10335 0.14 +0.0 1,792,901 + SGL_RS10335 0.14 -0.2 1,792,902 - SGL_RS10335 0.15 +0.6 1,792,971 + SGL_RS10335 0.23 -1.5 1,793,099 + SGL_RS10335 0.39 -0.7 1,793,116 - SGL_RS10335 0.41 +0.5 1,793,249 + SGL_RS10335 0.57 +0.0 1,793,249 + SGL_RS10335 0.57 -0.2 1,793,264 - SGL_RS10335 0.59 +0.2 1,793,313 - SGL_RS10335 0.65 +0.0 1,793,319 - SGL_RS10335 0.66 -0.0 1,793,483 + SGL_RS10335 0.86 +0.4 1,793,488 + SGL_RS10335 0.87 -0.2 1,793,491 - SGL_RS10335 0.87 -0.1 1,793,501 + SGL_RS10335 0.88 +0.3 1,793,509 - SGL_RS10335 0.89 -0.1 1,793,509 - SGL_RS10335 0.89 +0.2 1,793,513 + SGL_RS10335 0.90 +0.5 1,793,521 - +0.2 1,793,526 - -0.0 1,793,539 + -0.3 1,793,898 + -0.8 1,793,906 - -1.3 1,794,032 + SGL_RS10340 0.15 -0.7 1,794,184 - SGL_RS10340 0.28 -2.2 1,794,233 + SGL_RS10340 0.32 -1.4 1,794,241 - SGL_RS10340 0.33 -2.2 1,794,323 + SGL_RS10340 0.40 -1.2 1,794,348 + SGL_RS10340 0.42 -0.2 1,794,356 - SGL_RS10340 0.43 -1.0 1,794,401 - SGL_RS10340 0.47 -1.1 1,794,432 - SGL_RS10340 0.49 -0.6 1,794,442 + SGL_RS10340 0.50 -0.6 1,794,470 - SGL_RS10340 0.53 -1.3 1,794,512 + SGL_RS10340 0.56 -0.9 1,794,564 + SGL_RS10340 0.61 -3.1 1,794,572 - SGL_RS10340 0.61 -1.7 1,794,584 - SGL_RS10340 0.62 -0.9 1,794,584 - SGL_RS10340 0.62 -0.0 1,794,621 + SGL_RS10340 0.65 -0.7 1,794,664 - SGL_RS10340 0.69 -1.2 1,794,768 - SGL_RS10340 0.78 -1.3 1,794,797 + SGL_RS10340 0.80 -1.2 1,794,947 - -1.7 1,794,986 + -1.1 1,794,994 - -0.8 1,795,253 + SGL_RS10345 0.30 +0.1 1,795,261 - SGL_RS10345 0.32 +0.3 1,795,430 + SGL_RS10345 0.70 -0.6
Or see this region's nucleotide sequence