Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS09820

Experiment: growth in full media supplemented with 3 .M Cl2Co

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS09815 and SGL_RS09820 are separated by 53 nucleotidesSGL_RS09820 and SGL_RS09825 are separated by 134 nucleotides SGL_RS09815: SGL_RS09815 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 1,688,213 to 1,689,259 _RS09815 SGL_RS09820: SGL_RS09820 - ribosome maturation factor RimM, at 1,689,313 to 1,689,870 _RS09820 SGL_RS09825: SGL_RS09825 - SDR family oxidoreductase, at 1,690,005 to 1,690,934 _RS09825 Position (kb) 1689 1690Strain fitness (log2 ratio) -3 -2 -1 0 1at 1688.370 kb on - strand, within SGL_RS09815at 1688.393 kb on - strand, within SGL_RS09815at 1688.419 kb on - strand, within SGL_RS09815at 1688.419 kb on - strand, within SGL_RS09815at 1688.468 kb on - strand, within SGL_RS09815at 1688.552 kb on + strand, within SGL_RS09815at 1688.715 kb on + strand, within SGL_RS09815at 1688.745 kb on - strand, within SGL_RS09815at 1688.824 kb on + strand, within SGL_RS09815at 1688.898 kb on + strand, within SGL_RS09815at 1688.918 kb on - strand, within SGL_RS09815at 1688.996 kb on + strand, within SGL_RS09815at 1689.206 kb on + strandat 1689.321 kb on + strandat 1689.321 kb on + strandat 1689.387 kb on - strand, within SGL_RS09820at 1689.539 kb on - strand, within SGL_RS09820at 1689.598 kb on + strand, within SGL_RS09820at 1689.967 kb on + strandat 1690.256 kb on + strand, within SGL_RS09825

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co
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1,688,370 - SGL_RS09815 0.15 -1.1
1,688,393 - SGL_RS09815 0.17 -0.3
1,688,419 - SGL_RS09815 0.20 -0.5
1,688,419 - SGL_RS09815 0.20 +0.7
1,688,468 - SGL_RS09815 0.24 -0.3
1,688,552 + SGL_RS09815 0.32 -1.8
1,688,715 + SGL_RS09815 0.48 -0.7
1,688,745 - SGL_RS09815 0.51 -0.1
1,688,824 + SGL_RS09815 0.58 -0.9
1,688,898 + SGL_RS09815 0.65 -0.9
1,688,918 - SGL_RS09815 0.67 -1.7
1,688,996 + SGL_RS09815 0.75 -0.2
1,689,206 + -0.9
1,689,321 + +0.3
1,689,321 + -0.4
1,689,387 - SGL_RS09820 0.13 -2.8
1,689,539 - SGL_RS09820 0.41 -2.5
1,689,598 + SGL_RS09820 0.51 -3.2
1,689,967 + +0.3
1,690,256 + SGL_RS09825 0.27 +0.7

Or see this region's nucleotide sequence