Experiment: growth in full media supplemented with 3 .M Cl2Co
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS09780 and SGL_RS09785 are separated by 53 nucleotides SGL_RS09785 and SGL_RS09790 are separated by 236 nucleotides SGL_RS09790 and SGL_RS09795 are separated by 269 nucleotides
SGL_RS09780: SGL_RS09780 - SDR family oxidoreductase, at 1,682,870 to 1,683,529
_RS09780
SGL_RS09785: SGL_RS09785 - uracil-DNA glycosylase family protein, at 1,683,583 to 1,684,260
_RS09785
SGL_RS09790: SGL_RS09790 - hypothetical protein, at 1,684,497 to 1,684,691
_RS09790
SGL_RS09795: SGL_RS09795 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase, at 1,684,961 to 1,685,872
_RS09795
Position (kb) 1684
1685 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1683.705 kb on - strand, within SGL_RS09785 at 1683.940 kb on - strand, within SGL_RS09785 at 1683.953 kb on - strand, within SGL_RS09785 at 1684.006 kb on - strand, within SGL_RS09785 at 1684.060 kb on + strand, within SGL_RS09785 at 1684.068 kb on - strand, within SGL_RS09785 at 1684.074 kb on - strand, within SGL_RS09785 at 1684.102 kb on - strand, within SGL_RS09785 at 1684.102 kb on - strand, within SGL_RS09785 at 1684.176 kb on + strand, within SGL_RS09785 at 1684.176 kb on + strand, within SGL_RS09785 at 1684.197 kb on + strand at 1684.232 kb on + strand at 1684.376 kb on + strand at 1684.516 kb on + strand at 1684.615 kb on + strand, within SGL_RS09790 at 1684.615 kb on + strand, within SGL_RS09790 at 1684.615 kb on + strand, within SGL_RS09790 at 1684.615 kb on + strand, within SGL_RS09790 at 1684.623 kb on - strand, within SGL_RS09790 at 1684.626 kb on + strand, within SGL_RS09790 at 1684.647 kb on + strand, within SGL_RS09790 at 1684.677 kb on + strand at 1684.764 kb on - strand at 1684.805 kb on + strand at 1684.963 kb on + strand at 1684.991 kb on - strand at 1685.005 kb on - strand at 1685.015 kb on + strand at 1685.028 kb on - strand at 1685.171 kb on + strand, within SGL_RS09795 at 1685.175 kb on + strand, within SGL_RS09795 at 1685.206 kb on + strand, within SGL_RS09795 at 1685.206 kb on + strand, within SGL_RS09795 at 1685.214 kb on - strand, within SGL_RS09795 at 1685.214 kb on - strand, within SGL_RS09795 at 1685.244 kb on + strand, within SGL_RS09795 at 1685.244 kb on + strand, within SGL_RS09795 at 1685.252 kb on - strand, within SGL_RS09795 at 1685.422 kb on - strand, within SGL_RS09795 at 1685.454 kb on + strand, within SGL_RS09795 at 1685.523 kb on + strand, within SGL_RS09795 at 1685.531 kb on - strand, within SGL_RS09795 at 1685.562 kb on + strand, within SGL_RS09795 at 1685.636 kb on + strand, within SGL_RS09795 at 1685.641 kb on + strand, within SGL_RS09795 at 1685.678 kb on + strand, within SGL_RS09795 at 1685.683 kb on + strand, within SGL_RS09795
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co remove 1,683,705 - SGL_RS09785 0.18 -1.6 1,683,940 - SGL_RS09785 0.53 +0.0 1,683,953 - SGL_RS09785 0.55 -0.1 1,684,006 - SGL_RS09785 0.62 -0.2 1,684,060 + SGL_RS09785 0.70 +1.2 1,684,068 - SGL_RS09785 0.72 +0.0 1,684,074 - SGL_RS09785 0.72 +0.2 1,684,102 - SGL_RS09785 0.77 -0.8 1,684,102 - SGL_RS09785 0.77 +0.6 1,684,176 + SGL_RS09785 0.87 +0.3 1,684,176 + SGL_RS09785 0.87 +0.0 1,684,197 + -0.1 1,684,232 + -0.0 1,684,376 + -0.2 1,684,516 + -3.4 1,684,615 + SGL_RS09790 0.61 -2.6 1,684,615 + SGL_RS09790 0.61 -2.9 1,684,615 + SGL_RS09790 0.61 -3.7 1,684,615 + SGL_RS09790 0.61 -2.5 1,684,623 - SGL_RS09790 0.65 -1.9 1,684,626 + SGL_RS09790 0.66 -2.6 1,684,647 + SGL_RS09790 0.77 -2.5 1,684,677 + -2.8 1,684,764 - +0.3 1,684,805 + +0.2 1,684,963 + -0.2 1,684,991 - -0.3 1,685,005 - +0.2 1,685,015 + -0.2 1,685,028 - -0.2 1,685,171 + SGL_RS09795 0.23 +1.3 1,685,175 + SGL_RS09795 0.23 -0.3 1,685,206 + SGL_RS09795 0.27 +0.7 1,685,206 + SGL_RS09795 0.27 -1.0 1,685,214 - SGL_RS09795 0.28 -0.6 1,685,214 - SGL_RS09795 0.28 -0.2 1,685,244 + SGL_RS09795 0.31 +0.3 1,685,244 + SGL_RS09795 0.31 +0.6 1,685,252 - SGL_RS09795 0.32 +0.3 1,685,422 - SGL_RS09795 0.51 +0.4 1,685,454 + SGL_RS09795 0.54 -0.2 1,685,523 + SGL_RS09795 0.62 -0.0 1,685,531 - SGL_RS09795 0.62 +0.0 1,685,562 + SGL_RS09795 0.66 -0.0 1,685,636 + SGL_RS09795 0.74 +0.1 1,685,641 + SGL_RS09795 0.75 -0.6 1,685,678 + SGL_RS09795 0.79 -0.3 1,685,683 + SGL_RS09795 0.79 +0.2
Or see this region's nucleotide sequence