Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS08495

Experiment: growth in full media supplemented with 3 .M Cl2Co

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS08490 and SGL_RS08495 are separated by 195 nucleotidesSGL_RS08495 and SGL_RS08500 are separated by 27 nucleotides SGL_RS08490: SGL_RS08490 - sulfite exporter TauE/SafE family protein, at 1,405,981 to 1,406,847 _RS08490 SGL_RS08495: SGL_RS08495 - DUF3370 domain-containing protein, at 1,407,043 to 1,408,455 _RS08495 SGL_RS08500: SGL_RS08500 - GntR family transcriptional regulator, at 1,408,483 to 1,409,649 _RS08500 Position (kb) 1407 1408 1409Strain fitness (log2 ratio) -2 -1 0 1at 1406.186 kb on - strand, within SGL_RS08490at 1406.201 kb on - strand, within SGL_RS08490at 1406.243 kb on + strand, within SGL_RS08490at 1406.252 kb on - strand, within SGL_RS08490at 1406.363 kb on + strand, within SGL_RS08490at 1406.388 kb on + strand, within SGL_RS08490at 1406.433 kb on + strand, within SGL_RS08490at 1406.441 kb on + strand, within SGL_RS08490at 1406.469 kb on + strand, within SGL_RS08490at 1406.568 kb on + strand, within SGL_RS08490at 1406.827 kb on - strandat 1406.907 kb on + strandat 1407.141 kb on + strandat 1407.183 kb on + strandat 1407.283 kb on + strand, within SGL_RS08495at 1407.291 kb on - strand, within SGL_RS08495at 1407.337 kb on + strand, within SGL_RS08495at 1407.360 kb on + strand, within SGL_RS08495at 1407.386 kb on + strand, within SGL_RS08495at 1407.536 kb on + strand, within SGL_RS08495at 1407.761 kb on + strand, within SGL_RS08495at 1407.765 kb on - strand, within SGL_RS08495at 1407.774 kb on + strand, within SGL_RS08495at 1407.874 kb on + strand, within SGL_RS08495at 1408.023 kb on + strand, within SGL_RS08495at 1408.042 kb on - strand, within SGL_RS08495at 1408.070 kb on - strand, within SGL_RS08495at 1408.076 kb on - strand, within SGL_RS08495at 1408.269 kb on + strand, within SGL_RS08495at 1408.277 kb on - strand, within SGL_RS08495at 1408.355 kb on + strandat 1408.377 kb on + strandat 1408.385 kb on - strandat 1408.395 kb on - strandat 1408.395 kb on - strandat 1408.481 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co
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1,406,186 - SGL_RS08490 0.24 +0.1
1,406,201 - SGL_RS08490 0.25 +0.0
1,406,243 + SGL_RS08490 0.30 -0.2
1,406,252 - SGL_RS08490 0.31 -0.0
1,406,363 + SGL_RS08490 0.44 +0.6
1,406,388 + SGL_RS08490 0.47 +0.2
1,406,433 + SGL_RS08490 0.52 +0.1
1,406,441 + SGL_RS08490 0.53 -0.4
1,406,469 + SGL_RS08490 0.56 +0.8
1,406,568 + SGL_RS08490 0.68 +0.2
1,406,827 - -0.1
1,406,907 + +0.1
1,407,141 + -0.4
1,407,183 + -0.1
1,407,283 + SGL_RS08495 0.17 -0.2
1,407,291 - SGL_RS08495 0.18 -0.5
1,407,337 + SGL_RS08495 0.21 -1.2
1,407,360 + SGL_RS08495 0.22 -0.4
1,407,386 + SGL_RS08495 0.24 -0.3
1,407,536 + SGL_RS08495 0.35 -1.3
1,407,761 + SGL_RS08495 0.51 -1.2
1,407,765 - SGL_RS08495 0.51 -1.3
1,407,774 + SGL_RS08495 0.52 -1.3
1,407,874 + SGL_RS08495 0.59 -0.3
1,408,023 + SGL_RS08495 0.69 -0.8
1,408,042 - SGL_RS08495 0.71 -2.3
1,408,070 - SGL_RS08495 0.73 -1.2
1,408,076 - SGL_RS08495 0.73 -1.9
1,408,269 + SGL_RS08495 0.87 -1.0
1,408,277 - SGL_RS08495 0.87 -1.1
1,408,355 + +0.4
1,408,377 + -0.3
1,408,385 - -0.9
1,408,395 - -1.2
1,408,395 - +0.1
1,408,481 + +0.4

Or see this region's nucleotide sequence