Experiment: growth in full media supplemented with 3 .M Cl2Co
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS07955 and SGL_RS07960 are separated by 3 nucleotides SGL_RS07960 and SGL_RS07965 overlap by 8 nucleotides SGL_RS07965 and SGL_RS07970 are separated by 49 nucleotides
SGL_RS07955: SGL_RS07955 - hypothetical protein, at 1,299,120 to 1,299,725
_RS07955
SGL_RS07960: SGL_RS07960 - DUF29 domain-containing protein, at 1,299,729 to 1,300,166
_RS07960
SGL_RS07965: SGL_RS07965 - DUF4351 domain-containing protein, at 1,300,159 to 1,300,611
_RS07965
SGL_RS07970: SGL_RS07970 - pentapeptide repeat-containing protein, at 1,300,661 to 1,301,656
_RS07970
Position (kb)
1300
1301 Strain fitness (log2 ratio)
-2
-1
0
1 at 1299.173 kb on - strand at 1299.318 kb on - strand, within SGL_RS07955 at 1299.351 kb on + strand, within SGL_RS07955 at 1299.383 kb on + strand, within SGL_RS07955 at 1299.909 kb on + strand, within SGL_RS07960 at 1300.258 kb on - strand, within SGL_RS07965 at 1300.258 kb on - strand, within SGL_RS07965 at 1300.378 kb on + strand, within SGL_RS07965 at 1300.458 kb on + strand, within SGL_RS07965 at 1300.459 kb on - strand, within SGL_RS07965 at 1300.471 kb on - strand, within SGL_RS07965 at 1300.536 kb on + strand, within SGL_RS07965 at 1300.589 kb on - strand at 1300.761 kb on + strand, within SGL_RS07970 at 1300.871 kb on + strand, within SGL_RS07970 at 1300.872 kb on + strand, within SGL_RS07970 at 1300.879 kb on - strand, within SGL_RS07970 at 1300.901 kb on + strand, within SGL_RS07970 at 1300.901 kb on + strand, within SGL_RS07970 at 1300.909 kb on - strand, within SGL_RS07970 at 1300.949 kb on - strand, within SGL_RS07970 at 1301.014 kb on - strand, within SGL_RS07970 at 1301.021 kb on + strand, within SGL_RS07970 at 1301.029 kb on - strand, within SGL_RS07970 at 1301.039 kb on - strand, within SGL_RS07970 at 1301.039 kb on - strand, within SGL_RS07970 at 1301.039 kb on - strand, within SGL_RS07970 at 1301.039 kb on - strand, within SGL_RS07970 at 1301.039 kb on - strand, within SGL_RS07970 at 1301.109 kb on + strand, within SGL_RS07970 at 1301.121 kb on + strand, within SGL_RS07970 at 1301.137 kb on + strand, within SGL_RS07970 at 1301.137 kb on - strand, within SGL_RS07970 at 1301.182 kb on - strand, within SGL_RS07970 at 1301.197 kb on - strand, within SGL_RS07970 at 1301.224 kb on + strand, within SGL_RS07970 at 1301.424 kb on + strand, within SGL_RS07970 at 1301.429 kb on + strand, within SGL_RS07970 at 1301.457 kb on - strand, within SGL_RS07970 at 1301.462 kb on - strand, within SGL_RS07970 at 1301.538 kb on - strand, within SGL_RS07970 at 1301.572 kb on - strand at 1301.579 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co remove 1,299,173 - +0.5 1,299,318 - SGL_RS07955 0.33 -0.1 1,299,351 + SGL_RS07955 0.38 -0.3 1,299,383 + SGL_RS07955 0.43 +0.2 1,299,909 + SGL_RS07960 0.41 -0.2 1,300,258 - SGL_RS07965 0.22 -1.2 1,300,258 - SGL_RS07965 0.22 -2.1 1,300,378 + SGL_RS07965 0.48 -1.1 1,300,458 + SGL_RS07965 0.66 -0.8 1,300,459 - SGL_RS07965 0.66 -2.0 1,300,471 - SGL_RS07965 0.69 +0.1 1,300,536 + SGL_RS07965 0.83 -1.5 1,300,589 - -0.3 1,300,761 + SGL_RS07970 0.10 -0.0 1,300,871 + SGL_RS07970 0.21 +0.4 1,300,872 + SGL_RS07970 0.21 +0.0 1,300,879 - SGL_RS07970 0.22 -0.3 1,300,901 + SGL_RS07970 0.24 +0.0 1,300,901 + SGL_RS07970 0.24 +0.8 1,300,909 - SGL_RS07970 0.25 +0.5 1,300,949 - SGL_RS07970 0.29 +0.0 1,301,014 - SGL_RS07970 0.35 -0.4 1,301,021 + SGL_RS07970 0.36 +0.4 1,301,029 - SGL_RS07970 0.37 +0.2 1,301,039 - SGL_RS07970 0.38 -0.1 1,301,039 - SGL_RS07970 0.38 +0.0 1,301,039 - SGL_RS07970 0.38 +0.1 1,301,039 - SGL_RS07970 0.38 -1.0 1,301,039 - SGL_RS07970 0.38 +0.1 1,301,109 + SGL_RS07970 0.45 -0.4 1,301,121 + SGL_RS07970 0.46 -0.4 1,301,137 + SGL_RS07970 0.48 -0.0 1,301,137 - SGL_RS07970 0.48 +0.9 1,301,182 - SGL_RS07970 0.52 -0.0 1,301,197 - SGL_RS07970 0.54 +0.4 1,301,224 + SGL_RS07970 0.57 +0.1 1,301,424 + SGL_RS07970 0.77 +0.3 1,301,429 + SGL_RS07970 0.77 -0.1 1,301,457 - SGL_RS07970 0.80 +0.0 1,301,462 - SGL_RS07970 0.80 -0.3 1,301,538 - SGL_RS07970 0.88 +0.3 1,301,572 - +0.7 1,301,579 + -0.2
Or see this region's nucleotide sequence