Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS05655

Experiment: growth in full media supplemented with 3 .M Cl2Co

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS05645 and SGL_RS05650 are separated by 82 nucleotidesSGL_RS05650 and SGL_RS05655 are separated by 40 nucleotidesSGL_RS05655 and SGL_RS05660 are separated by 156 nucleotides SGL_RS05645: SGL_RS05645 - hypothetical protein, at 815,703 to 816,215 _RS05645 SGL_RS05650: SGL_RS05650 - Uma2 family endonuclease, at 816,298 to 816,942 _RS05650 SGL_RS05655: SGL_RS05655 - TPM domain-containing protein, at 816,983 to 817,810 _RS05655 SGL_RS05660: SGL_RS05660 - transketolase, at 817,967 to 819,979 _RS05660 Position (kb) 816 817 818Strain fitness (log2 ratio) -3 -2 -1 0 1at 816.016 kb on - strand, within SGL_RS05645at 816.062 kb on - strand, within SGL_RS05645at 816.062 kb on - strand, within SGL_RS05645at 816.071 kb on + strand, within SGL_RS05645at 816.099 kb on + strand, within SGL_RS05645at 816.187 kb on + strandat 816.687 kb on + strand, within SGL_RS05650at 816.722 kb on + strand, within SGL_RS05650at 816.752 kb on + strand, within SGL_RS05650at 816.790 kb on + strand, within SGL_RS05650at 816.963 kb on + strandat 817.263 kb on + strand, within SGL_RS05655at 817.263 kb on + strand, within SGL_RS05655at 817.263 kb on + strand, within SGL_RS05655at 817.263 kb on + strand, within SGL_RS05655at 817.296 kb on + strand, within SGL_RS05655at 817.576 kb on - strand, within SGL_RS05655at 817.865 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co
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816,016 - SGL_RS05645 0.61 +0.1
816,062 - SGL_RS05645 0.70 -0.6
816,062 - SGL_RS05645 0.70 -0.1
816,071 + SGL_RS05645 0.72 -0.3
816,099 + SGL_RS05645 0.77 -0.1
816,187 + -0.1
816,687 + SGL_RS05650 0.60 -0.1
816,722 + SGL_RS05650 0.66 -0.7
816,752 + SGL_RS05650 0.70 -0.2
816,790 + SGL_RS05650 0.76 -0.3
816,963 + -0.3
817,263 + SGL_RS05655 0.34 -1.6
817,263 + SGL_RS05655 0.34 -1.3
817,263 + SGL_RS05655 0.34 -2.9
817,263 + SGL_RS05655 0.34 -2.1
817,296 + SGL_RS05655 0.38 -0.3
817,576 - SGL_RS05655 0.72 -2.0
817,865 - -0.7

Or see this region's nucleotide sequence