Experiment: growth in full media supplemented with 3 .M Cl2Co
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02340 and SGL_RS02345 are separated by 78 nucleotides SGL_RS02345 and SGL_RS02350 are separated by 83 nucleotides SGL_RS02350 and SGL_RS02355 are separated by 363 nucleotides
SGL_RS02340: SGL_RS02340 - hypothetical protein, at 109,222 to 110,313
_RS02340
SGL_RS02345: SGL_RS02345 - type II toxin-antitoxin system PrlF family antitoxin, at 110,392 to 110,724
_RS02345
SGL_RS02350: SGL_RS02350 - type II toxin-antitoxin system YhaV family toxin, at 110,808 to 111,224
_RS02350
SGL_RS02355: SGL_RS02355 - hypothetical protein, at 111,588 to 112,559
_RS02355
Position (kb) 110
111 Strain fitness (log2 ratio) -1
0
1 at 109.479 kb on - strand, within SGL_RS02340 at 109.479 kb on - strand, within SGL_RS02340 at 109.497 kb on + strand, within SGL_RS02340 at 109.505 kb on - strand, within SGL_RS02340 at 109.505 kb on - strand, within SGL_RS02340 at 109.550 kb on - strand, within SGL_RS02340 at 109.608 kb on + strand, within SGL_RS02340 at 109.608 kb on + strand, within SGL_RS02340 at 109.608 kb on + strand, within SGL_RS02340 at 109.608 kb on + strand, within SGL_RS02340 at 109.608 kb on + strand, within SGL_RS02340 at 109.608 kb on + strand, within SGL_RS02340 at 109.616 kb on - strand, within SGL_RS02340 at 109.616 kb on - strand, within SGL_RS02340 at 109.616 kb on - strand, within SGL_RS02340 at 109.966 kb on - strand, within SGL_RS02340 at 110.044 kb on + strand, within SGL_RS02340 at 110.052 kb on - strand, within SGL_RS02340 at 110.064 kb on - strand, within SGL_RS02340 at 110.069 kb on - strand, within SGL_RS02340 at 110.157 kb on + strand, within SGL_RS02340 at 110.165 kb on - strand, within SGL_RS02340 at 110.212 kb on - strand at 110.278 kb on + strand at 110.279 kb on - strand at 110.327 kb on - strand at 110.382 kb on + strand at 110.481 kb on - strand, within SGL_RS02345 at 110.551 kb on - strand, within SGL_RS02345 at 110.609 kb on - strand, within SGL_RS02345 at 110.647 kb on - strand, within SGL_RS02345 at 110.759 kb on + strand at 110.907 kb on + strand, within SGL_RS02350 at 111.105 kb on + strand, within SGL_RS02350 at 111.181 kb on - strand, within SGL_RS02350 at 111.519 kb on - strand at 111.584 kb on + strand at 111.687 kb on + strand, within SGL_RS02355
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co remove 109,479 - SGL_RS02340 0.24 -0.6 109,479 - SGL_RS02340 0.24 +0.1 109,497 + SGL_RS02340 0.25 -0.0 109,505 - SGL_RS02340 0.26 +0.2 109,505 - SGL_RS02340 0.26 -0.3 109,550 - SGL_RS02340 0.30 -0.2 109,608 + SGL_RS02340 0.35 -0.0 109,608 + SGL_RS02340 0.35 +0.0 109,608 + SGL_RS02340 0.35 -0.3 109,608 + SGL_RS02340 0.35 +0.3 109,608 + SGL_RS02340 0.35 +0.8 109,608 + SGL_RS02340 0.35 -0.1 109,616 - SGL_RS02340 0.36 -0.4 109,616 - SGL_RS02340 0.36 +0.3 109,616 - SGL_RS02340 0.36 +0.1 109,966 - SGL_RS02340 0.68 +0.1 110,044 + SGL_RS02340 0.75 -0.2 110,052 - SGL_RS02340 0.76 -0.1 110,064 - SGL_RS02340 0.77 +0.0 110,069 - SGL_RS02340 0.78 +0.2 110,157 + SGL_RS02340 0.86 -0.6 110,165 - SGL_RS02340 0.86 +0.1 110,212 - -0.3 110,278 + +0.0 110,279 - +0.0 110,327 - -0.0 110,382 + -0.6 110,481 - SGL_RS02345 0.27 -0.6 110,551 - SGL_RS02345 0.48 -1.1 110,609 - SGL_RS02345 0.65 -1.3 110,647 - SGL_RS02345 0.77 -1.2 110,759 + +0.1 110,907 + SGL_RS02350 0.24 -0.1 111,105 + SGL_RS02350 0.71 -0.3 111,181 - SGL_RS02350 0.89 -0.0 111,519 - -0.3 111,584 + +0.0 111,687 + SGL_RS02355 0.10 +0.4
Or see this region's nucleotide sequence