Experiment: growth in full media supplemented with 3 .M Cl2Co
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02305 and SGL_RS02310 are separated by 0 nucleotides SGL_RS02310 and SGL_RS02315 are separated by 112 nucleotides
SGL_RS02305: SGL_RS02305 - NAD-dependent malic enzyme, at 99,402 to 100,793
_RS02305
SGL_RS02310: SGL_RS02310 - cysteine synthase A, at 100,794 to 101,771
_RS02310
SGL_RS02315: SGL_RS02315 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, at 101,884 to 102,831
_RS02315
Position (kb) 100
101
102 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 99.895 kb on - strand, within SGL_RS02305 at 100.009 kb on + strand, within SGL_RS02305 at 100.118 kb on + strand, within SGL_RS02305 at 100.121 kb on - strand, within SGL_RS02305 at 100.208 kb on - strand, within SGL_RS02305 at 100.229 kb on - strand, within SGL_RS02305 at 100.354 kb on - strand, within SGL_RS02305 at 100.439 kb on + strand, within SGL_RS02305 at 100.467 kb on + strand, within SGL_RS02305 at 100.472 kb on + strand, within SGL_RS02305 at 100.480 kb on - strand, within SGL_RS02305 at 100.676 kb on - strand at 100.678 kb on + strand at 100.684 kb on - strand at 100.691 kb on - strand at 101.089 kb on + strand, within SGL_RS02310 at 101.130 kb on - strand, within SGL_RS02310 at 101.139 kb on - strand, within SGL_RS02310 at 101.149 kb on - strand, within SGL_RS02310 at 101.179 kb on + strand, within SGL_RS02310 at 101.179 kb on + strand, within SGL_RS02310 at 101.187 kb on - strand, within SGL_RS02310 at 101.212 kb on - strand, within SGL_RS02310 at 101.218 kb on - strand, within SGL_RS02310 at 101.220 kb on + strand, within SGL_RS02310 at 101.308 kb on + strand, within SGL_RS02310 at 101.358 kb on - strand, within SGL_RS02310 at 101.363 kb on - strand, within SGL_RS02310 at 101.363 kb on - strand, within SGL_RS02310 at 101.415 kb on - strand, within SGL_RS02310 at 101.428 kb on + strand, within SGL_RS02310 at 101.436 kb on - strand, within SGL_RS02310 at 101.436 kb on - strand, within SGL_RS02310 at 101.449 kb on + strand, within SGL_RS02310 at 101.505 kb on + strand, within SGL_RS02310 at 101.735 kb on + strand at 101.781 kb on + strand at 101.781 kb on + strand at 101.809 kb on - strand at 101.819 kb on - strand at 101.824 kb on - strand at 101.844 kb on - strand at 101.885 kb on - strand at 102.211 kb on + strand, within SGL_RS02315
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M Cl2Co remove 99,895 - SGL_RS02305 0.35 +0.5 100,009 + SGL_RS02305 0.44 -1.1 100,118 + SGL_RS02305 0.51 -0.4 100,121 - SGL_RS02305 0.52 +1.5 100,208 - SGL_RS02305 0.58 +0.8 100,229 - SGL_RS02305 0.59 -0.2 100,354 - SGL_RS02305 0.68 -0.1 100,439 + SGL_RS02305 0.74 -0.3 100,467 + SGL_RS02305 0.77 +0.0 100,472 + SGL_RS02305 0.77 +0.9 100,480 - SGL_RS02305 0.77 +0.1 100,676 - +1.3 100,678 + -0.5 100,684 - +1.4 100,691 - +0.4 101,089 + SGL_RS02310 0.30 -2.7 101,130 - SGL_RS02310 0.34 -3.3 101,139 - SGL_RS02310 0.35 -1.6 101,149 - SGL_RS02310 0.36 -3.4 101,179 + SGL_RS02310 0.39 -2.2 101,179 + SGL_RS02310 0.39 -1.9 101,187 - SGL_RS02310 0.40 -2.2 101,212 - SGL_RS02310 0.43 -2.9 101,218 - SGL_RS02310 0.43 -1.7 101,220 + SGL_RS02310 0.44 -2.6 101,308 + SGL_RS02310 0.53 -3.0 101,358 - SGL_RS02310 0.58 -2.7 101,363 - SGL_RS02310 0.58 -3.4 101,363 - SGL_RS02310 0.58 -1.4 101,415 - SGL_RS02310 0.63 -2.5 101,428 + SGL_RS02310 0.65 -3.0 101,436 - SGL_RS02310 0.66 -3.1 101,436 - SGL_RS02310 0.66 -3.6 101,449 + SGL_RS02310 0.67 -2.3 101,505 + SGL_RS02310 0.73 -2.2 101,735 + -3.1 101,781 + -0.1 101,781 + -0.1 101,809 - +0.1 101,819 - +0.2 101,824 - -0.8 101,844 - -0.4 101,885 - -0.2 102,211 + SGL_RS02315 0.34 -0.6
Or see this region's nucleotide sequence