Experiment: growth in full media supplemented with 5mM sodum metaarsenite
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15190 and SGL_RS15195 are separated by 151 nucleotides SGL_RS15195 and SGL_RS15200 are separated by 210 nucleotides SGL_RS15200 and SGL_RS15205 are separated by 28 nucleotides SGL_RS15205 and SGL_RS15210 are separated by 166 nucleotides
SGL_RS15190: SGL_RS15190 - NAD(P)H-quinone oxidoreductase subunit 5, at 2,857,874 to 2,859,919
_RS15190
SGL_RS15195: SGL_RS15195 - hypothetical protein, at 2,860,071 to 2,860,289
_RS15195
SGL_RS15200: SGL_RS15200 - hypothetical protein, at 2,860,500 to 2,861,072
_RS15200
SGL_RS15205: SGL_RS15205 - succinate dehydrogenase iron-sulfur subunit, at 2,861,101 to 2,861,838
_RS15205
SGL_RS15210: SGL_RS15210 - AbrB family transcriptional regulator, at 2,862,005 to 2,862,394
_RS15210
Position (kb)
2860
2861
2862 Strain fitness (log2 ratio)
-2
-1
0
1 at 2859.884 kb on + strand at 2859.884 kb on + strand at 2859.892 kb on - strand at 2860.213 kb on - strand, within SGL_RS15195 at 2860.274 kb on - strand at 2860.328 kb on - strand at 2860.652 kb on - strand, within SGL_RS15200 at 2860.673 kb on - strand, within SGL_RS15200 at 2860.966 kb on + strand, within SGL_RS15200 at 2861.148 kb on - strand at 2861.152 kb on + strand at 2861.240 kb on + strand, within SGL_RS15205 at 2861.409 kb on + strand, within SGL_RS15205 at 2861.409 kb on + strand, within SGL_RS15205 at 2861.409 kb on + strand, within SGL_RS15205 at 2861.554 kb on - strand, within SGL_RS15205 at 2861.616 kb on + strand, within SGL_RS15205 at 2861.626 kb on + strand, within SGL_RS15205 at 2861.626 kb on + strand, within SGL_RS15205 at 2861.730 kb on + strand, within SGL_RS15205
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 5mM sodum metaarsenite remove 2,859,884 + -0.8 2,859,884 + -0.1 2,859,892 - +1.0 2,860,213 - SGL_RS15195 0.65 -0.1 2,860,274 - -0.2 2,860,328 - -0.6 2,860,652 - SGL_RS15200 0.27 -0.3 2,860,673 - SGL_RS15200 0.30 -2.2 2,860,966 + SGL_RS15200 0.81 -1.3 2,861,148 - +1.3 2,861,152 + +0.2 2,861,240 + SGL_RS15205 0.19 -0.2 2,861,409 + SGL_RS15205 0.42 +0.0 2,861,409 + SGL_RS15205 0.42 -0.4 2,861,409 + SGL_RS15205 0.42 -0.7 2,861,554 - SGL_RS15205 0.61 -0.2 2,861,616 + SGL_RS15205 0.70 -0.2 2,861,626 + SGL_RS15205 0.71 -0.6 2,861,626 + SGL_RS15205 0.71 +0.8 2,861,730 + SGL_RS15205 0.85 +0.2
Or see this region's nucleotide sequence