Experiment: growth in full media supplemented with 5mM sodum metaarsenite
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS11645 and SGL_RS11650 overlap by 4 nucleotides SGL_RS11650 and SGL_RS11655 are separated by 33 nucleotides SGL_RS11655 and SGL_RS11660 are separated by 273 nucleotides
SGL_RS11645: SGL_RS11645 - photosystem II protein Psb27, at 2,070,975 to 2,071,382
_RS11645
SGL_RS11650: SGL_RS11650 - ribonuclease III, at 2,071,379 to 2,072,074
_RS11650
SGL_RS11655: SGL_RS11655 - iron export ABC transporter permease subunit FetB, at 2,072,108 to 2,072,887
_RS11655
SGL_RS11660: SGL_RS11660 - carotenoid oxygenase family protein, at 2,073,161 to 2,074,603
_RS11660
Position (kb)
2072
2073 Strain fitness (log2 ratio)
-1
0
1 at 2071.123 kb on - strand, within SGL_RS11645 at 2071.169 kb on - strand, within SGL_RS11645 at 2071.483 kb on - strand, within SGL_RS11650 at 2071.523 kb on - strand, within SGL_RS11650 at 2071.568 kb on + strand, within SGL_RS11650 at 2071.739 kb on + strand, within SGL_RS11650 at 2071.751 kb on + strand, within SGL_RS11650 at 2071.805 kb on - strand, within SGL_RS11650 at 2071.883 kb on + strand, within SGL_RS11650 at 2071.998 kb on + strand, within SGL_RS11650 at 2072.044 kb on - strand at 2072.044 kb on - strand at 2072.080 kb on + strand at 2072.468 kb on + strand, within SGL_RS11655 at 2072.652 kb on - strand, within SGL_RS11655 at 2072.766 kb on - strand, within SGL_RS11655 at 2072.965 kb on - strand at 2073.574 kb on + strand, within SGL_RS11660 at 2073.574 kb on + strand, within SGL_RS11660 at 2073.601 kb on + strand, within SGL_RS11660 at 2073.819 kb on + strand, within SGL_RS11660
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 5mM sodum metaarsenite remove 2,071,123 - SGL_RS11645 0.36 +0.0 2,071,169 - SGL_RS11645 0.48 -0.1 2,071,483 - SGL_RS11650 0.15 +0.1 2,071,523 - SGL_RS11650 0.21 +0.6 2,071,568 + SGL_RS11650 0.27 -0.2 2,071,739 + SGL_RS11650 0.52 +0.2 2,071,751 + SGL_RS11650 0.53 +0.3 2,071,805 - SGL_RS11650 0.61 +0.3 2,071,883 + SGL_RS11650 0.72 +0.0 2,071,998 + SGL_RS11650 0.89 -0.1 2,072,044 - -0.5 2,072,044 - -0.2 2,072,080 + -0.7 2,072,468 + SGL_RS11655 0.46 -1.3 2,072,652 - SGL_RS11655 0.70 -1.0 2,072,766 - SGL_RS11655 0.84 +0.7 2,072,965 - -0.4 2,073,574 + SGL_RS11660 0.29 -0.2 2,073,574 + SGL_RS11660 0.29 -0.4 2,073,601 + SGL_RS11660 0.30 +0.7 2,073,819 + SGL_RS11660 0.46 +0.1
Or see this region's nucleotide sequence