Experiment: growth in full media supplemented with 5mM sodum metaarsenite
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS04715 and SGL_RS04720 are separated by 569 nucleotides SGL_RS04720 and SGL_RS19335 are separated by 91 nucleotides SGL_RS19335 and SGL_RS04725 are separated by 19 nucleotides SGL_RS04725 and SGL_RS04730 are separated by 57 nucleotides
SGL_RS04715: SGL_RS04715 - hypothetical protein, at 610,053 to 610,487
_RS04715
SGL_RS04720: SGL_RS04720 - iron uptake porin, at 611,057 to 612,832
_RS04720
SGL_RS19335: SGL_RS19335 - hypothetical protein, at 612,924 to 613,082
_RS19335
SGL_RS04725: SGL_RS04725 - response regulator transcription factor, at 613,102 to 613,743
_RS04725
SGL_RS04730: SGL_RS04730 - N-acetylmuramoyl-L-alanine amidase, at 613,801 to 614,817
_RS04730
Position (kb) 611
612
613 Strain fitness (log2 ratio) -2
-1
0
1 at 610.114 kb on - strand, within SGL_RS04715 at 610.255 kb on + strand, within SGL_RS04715 at 610.256 kb on - strand, within SGL_RS04715 at 610.461 kb on + strand at 610.468 kb on + strand at 610.558 kb on + strand at 610.810 kb on - strand at 611.107 kb on - strand at 611.143 kb on + strand at 611.239 kb on + strand, within SGL_RS04720 at 611.248 kb on + strand, within SGL_RS04720 at 611.678 kb on + strand, within SGL_RS04720 at 611.758 kb on + strand, within SGL_RS04720 at 612.071 kb on - strand, within SGL_RS04720 at 612.141 kb on + strand, within SGL_RS04720 at 612.252 kb on + strand, within SGL_RS04720 at 612.255 kb on - strand, within SGL_RS04720 at 612.260 kb on - strand, within SGL_RS04720 at 612.811 kb on - strand at 612.836 kb on - strand at 613.161 kb on - strand at 613.218 kb on - strand, within SGL_RS04725 at 613.312 kb on + strand, within SGL_RS04725 at 613.559 kb on - strand, within SGL_RS04725 at 613.659 kb on - strand, within SGL_RS04725 at 613.713 kb on - strand at 613.713 kb on - strand at 613.770 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 5mM sodum metaarsenite remove 610,114 - SGL_RS04715 0.14 -0.5 610,255 + SGL_RS04715 0.46 -0.2 610,256 - SGL_RS04715 0.47 -0.2 610,461 + +0.1 610,468 + +0.8 610,558 + +0.1 610,810 - -0.1 611,107 - -2.5 611,143 + +0.4 611,239 + SGL_RS04720 0.10 +1.0 611,248 + SGL_RS04720 0.11 -1.4 611,678 + SGL_RS04720 0.35 -1.6 611,758 + SGL_RS04720 0.39 -0.6 612,071 - SGL_RS04720 0.57 -0.0 612,141 + SGL_RS04720 0.61 -0.0 612,252 + SGL_RS04720 0.67 -1.6 612,255 - SGL_RS04720 0.67 +1.0 612,260 - SGL_RS04720 0.68 +1.0 612,811 - -2.2 612,836 - +0.1 613,161 - -1.1 613,218 - SGL_RS04725 0.18 -0.2 613,312 + SGL_RS04725 0.33 -0.1 613,559 - SGL_RS04725 0.71 +0.5 613,659 - SGL_RS04725 0.87 +0.2 613,713 - +0.4 613,713 - -0.8 613,770 + -0.2
Or see this region's nucleotide sequence