Experiment: growth in full media supplemented with 5mM sodum metaarsenite
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS03865 and SGL_RS03870 are separated by 237 nucleotides SGL_RS03870 and SGL_RS18680 are separated by 33 nucleotides SGL_RS18680 and SGL_RS19780 overlap by 91 nucleotides
SGL_RS03865: SGL_RS03865 - calcium/sodium antiporter, at 419,161 to 420,264
_RS03865
SGL_RS03870: SGL_RS03870 - histidinol dehydrogenase, at 420,502 to 421,731
_RS03870
SGL_RS18680: SGL_RS18680 - IS630 family transposase, at 421,765 to 422,343
_RS18680
SGL_RS19780: SGL_RS19780 - IS630 transposase-related protein, at 422,253 to 422,612
_RS19780
Position (kb) 420
421
422 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 419.894 kb on + strand, within SGL_RS03865 at 420.203 kb on + strand at 420.203 kb on + strand at 420.203 kb on + strand at 420.203 kb on + strand at 420.211 kb on - strand at 420.211 kb on - strand at 420.211 kb on - strand at 420.211 kb on - strand at 420.306 kb on - strand at 420.313 kb on + strand at 420.321 kb on - strand at 420.353 kb on + strand at 420.376 kb on + strand at 420.407 kb on + strand at 420.430 kb on - strand at 420.442 kb on + strand at 420.464 kb on + strand at 420.466 kb on + strand at 420.474 kb on - strand at 420.559 kb on - strand at 420.653 kb on - strand, within SGL_RS03870 at 420.720 kb on + strand, within SGL_RS03870 at 420.728 kb on - strand, within SGL_RS03870 at 420.738 kb on - strand, within SGL_RS03870 at 420.865 kb on - strand, within SGL_RS03870 at 420.902 kb on - strand, within SGL_RS03870 at 420.921 kb on + strand, within SGL_RS03870 at 420.998 kb on + strand, within SGL_RS03870 at 421.026 kb on + strand, within SGL_RS03870 at 421.082 kb on - strand, within SGL_RS03870 at 421.228 kb on + strand, within SGL_RS03870 at 421.251 kb on - strand, within SGL_RS03870 at 421.251 kb on - strand, within SGL_RS03870 at 421.355 kb on + strand, within SGL_RS03870 at 421.443 kb on + strand, within SGL_RS03870 at 421.445 kb on - strand, within SGL_RS03870 at 421.492 kb on + strand, within SGL_RS03870 at 421.550 kb on + strand, within SGL_RS03870 at 421.705 kb on - strand at 421.710 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 5mM sodum metaarsenite remove 419,894 + SGL_RS03865 0.66 -0.3 420,203 + -0.1 420,203 + -0.0 420,203 + +0.4 420,203 + -0.1 420,211 - +0.3 420,211 - +0.2 420,211 - -0.4 420,211 - -0.0 420,306 - -0.1 420,313 + -0.1 420,321 - +0.1 420,353 + -1.0 420,376 + -0.4 420,407 + +0.3 420,430 - +0.4 420,442 + -0.5 420,464 + -0.0 420,466 + -0.6 420,474 - -0.6 420,559 - -0.8 420,653 - SGL_RS03870 0.12 -1.5 420,720 + SGL_RS03870 0.18 -0.5 420,728 - SGL_RS03870 0.18 -0.8 420,738 - SGL_RS03870 0.19 -1.8 420,865 - SGL_RS03870 0.30 -1.8 420,902 - SGL_RS03870 0.33 -3.1 420,921 + SGL_RS03870 0.34 -0.9 420,998 + SGL_RS03870 0.40 -0.7 421,026 + SGL_RS03870 0.43 -0.4 421,082 - SGL_RS03870 0.47 -1.2 421,228 + SGL_RS03870 0.59 -0.5 421,251 - SGL_RS03870 0.61 -0.2 421,251 - SGL_RS03870 0.61 -2.2 421,355 + SGL_RS03870 0.69 -1.1 421,443 + SGL_RS03870 0.77 -2.5 421,445 - SGL_RS03870 0.77 -0.7 421,492 + SGL_RS03870 0.80 -0.6 421,550 + SGL_RS03870 0.85 -0.3 421,705 - -1.6 421,710 - -0.5
Or see this region's nucleotide sequence