Experiment: growth in full media supplemented with 5 .M CuSO4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS02390 and SGL_RS02395 are separated by 37 nucleotides SGL_RS02395 and SGL_RS02400 are separated by 335 nucleotides SGL_RS02400 and SGL_RS02405 are separated by 181 nucleotides
SGL_RS02390: SGL_RS02390 - NAD(P)/FAD-dependent oxidoreductase, at 118,333 to 119,532
_RS02390
SGL_RS02395: SGL_RS02395 - hypothetical protein, at 119,570 to 119,962
_RS02395
SGL_RS02400: SGL_RS02400 - hypothetical protein, at 120,298 to 120,537
_RS02400
SGL_RS02405: SGL_RS02405 - tyrosine-type recombinase/integrase, at 120,719 to 121,660
_RS02405
Position (kb) 120
121 Strain fitness (log2 ratio) -1
0
1 at 119.334 kb on + strand, within SGL_RS02390 at 119.419 kb on - strand at 119.466 kb on - strand at 119.495 kb on - strand at 119.496 kb on + strand at 119.601 kb on - strand at 119.609 kb on + strand at 119.636 kb on - strand, within SGL_RS02395 at 119.786 kb on - strand, within SGL_RS02395 at 119.913 kb on - strand, within SGL_RS02395 at 120.235 kb on + strand at 120.304 kb on - strand at 120.401 kb on + strand, within SGL_RS02400 at 120.432 kb on + strand, within SGL_RS02400 at 120.541 kb on + strand at 120.551 kb on - strand at 120.776 kb on + strand at 120.784 kb on + strand at 121.196 kb on + strand, within SGL_RS02405 at 121.323 kb on - strand, within SGL_RS02405 at 121.373 kb on + strand, within SGL_RS02405 at 121.386 kb on - strand, within SGL_RS02405 at 121.430 kb on + strand, within SGL_RS02405 at 121.431 kb on + strand, within SGL_RS02405 at 121.440 kb on - strand, within SGL_RS02405
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 5 .M CuSO4 remove 119,334 + SGL_RS02390 0.83 +0.3 119,419 - +0.0 119,466 - +0.3 119,495 - +0.1 119,496 + +0.2 119,601 - +1.4 119,609 + +0.3 119,636 - SGL_RS02395 0.17 +0.7 119,786 - SGL_RS02395 0.55 -0.8 119,913 - SGL_RS02395 0.87 +0.7 120,235 + -0.2 120,304 - -0.2 120,401 + SGL_RS02400 0.43 +0.0 120,432 + SGL_RS02400 0.56 +1.2 120,541 + -0.0 120,551 - -0.2 120,776 + +0.2 120,784 + +0.1 121,196 + SGL_RS02405 0.51 +0.5 121,323 - SGL_RS02405 0.64 -0.3 121,373 + SGL_RS02405 0.69 -0.0 121,386 - SGL_RS02405 0.71 -0.3 121,430 + SGL_RS02405 0.75 +0.2 121,431 + SGL_RS02405 0.76 +0.5 121,440 - SGL_RS02405 0.77 +0.9
Or see this region's nucleotide sequence