Experiment: growth in full media supplemented with 3 .M CuSO4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS13330 and SGL_RS13335 overlap by 26 nucleotides SGL_RS13335 and SGL_RS13340 overlap by 4 nucleotides SGL_RS13340 and SGL_RS13345 are separated by 77 nucleotides
SGL_RS13330: SGL_RS13330 - histidine--tRNA ligase, at 2,456,935 to 2,458,278
_RS13330
SGL_RS13335: SGL_RS13335 - hypothetical protein, at 2,458,253 to 2,459,377
_RS13335
SGL_RS13340: SGL_RS13340 - GNAT family N-acetyltransferase, at 2,459,374 to 2,460,282
_RS13340
SGL_RS13345: SGL_RS13345 - hypothetical protein, at 2,460,360 to 2,461,058
_RS13345
Position (kb)
2458
2459
2460 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2458.448 kb on + strand, within SGL_RS13335 at 2458.485 kb on + strand, within SGL_RS13335 at 2458.578 kb on + strand, within SGL_RS13335 at 2458.667 kb on + strand, within SGL_RS13335 at 2458.712 kb on - strand, within SGL_RS13335 at 2458.951 kb on + strand, within SGL_RS13335 at 2459.196 kb on - strand, within SGL_RS13335 at 2459.315 kb on + strand at 2459.390 kb on - strand at 2459.407 kb on - strand at 2459.519 kb on - strand, within SGL_RS13340 at 2459.519 kb on - strand, within SGL_RS13340 at 2459.631 kb on - strand, within SGL_RS13340 at 2459.785 kb on + strand, within SGL_RS13340 at 2459.916 kb on - strand, within SGL_RS13340 at 2459.944 kb on + strand, within SGL_RS13340 at 2459.956 kb on + strand, within SGL_RS13340 at 2459.964 kb on - strand, within SGL_RS13340 at 2459.964 kb on - strand, within SGL_RS13340 at 2459.964 kb on - strand, within SGL_RS13340 at 2460.251 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M CuSO4 remove 2,458,448 + SGL_RS13335 0.17 -3.0 2,458,485 + SGL_RS13335 0.21 -2.2 2,458,578 + SGL_RS13335 0.29 -1.0 2,458,667 + SGL_RS13335 0.37 -0.8 2,458,712 - SGL_RS13335 0.41 -1.4 2,458,951 + SGL_RS13335 0.62 -1.2 2,459,196 - SGL_RS13335 0.84 -1.5 2,459,315 + -0.3 2,459,390 - -0.4 2,459,407 - -0.3 2,459,519 - SGL_RS13340 0.16 +0.1 2,459,519 - SGL_RS13340 0.16 +0.3 2,459,631 - SGL_RS13340 0.28 -0.5 2,459,785 + SGL_RS13340 0.45 -0.2 2,459,916 - SGL_RS13340 0.60 -0.7 2,459,944 + SGL_RS13340 0.63 -0.6 2,459,956 + SGL_RS13340 0.64 -0.3 2,459,964 - SGL_RS13340 0.65 -1.0 2,459,964 - SGL_RS13340 0.65 +0.1 2,459,964 - SGL_RS13340 0.65 -0.7 2,460,251 + -1.0
Or see this region's nucleotide sequence