Experiment: growth in full media supplemented with 3 .M CuSO4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS09455 and SGL_RS09460 are separated by 111 nucleotides SGL_RS09460 and SGL_RS09465 are separated by 36 nucleotides SGL_RS09465 and SGL_RS18855 are separated by 26 nucleotides
SGL_RS09455: SGL_RS09455 - ABC transporter permease, at 1,621,021 to 1,621,881
_RS09455
SGL_RS09460: SGL_RS09460 - polysaccharide ABC transporter ATP-binding protein, at 1,621,993 to 1,623,093
_RS09460
SGL_RS09465: SGL_RS09465 - IS4-like element IS4Sa family transposase, at 1,623,130 to 1,623,696
_RS09465
SGL_RS18855: SGL_RS18855 - IS630-like element ISTcSa family transposase, at 1,623,723 to 1,624,571
_RS18855
Position (kb)
1621
1622
1623
1624 Strain fitness (log2 ratio)
-2
-1
0
1 at 1621.306 kb on - strand, within SGL_RS09455 at 1621.338 kb on + strand, within SGL_RS09455 at 1621.430 kb on - strand, within SGL_RS09455 at 1621.578 kb on - strand, within SGL_RS09455 at 1621.647 kb on - strand, within SGL_RS09455 at 1621.683 kb on + strand, within SGL_RS09455 at 1621.688 kb on + strand, within SGL_RS09455 at 1621.696 kb on - strand, within SGL_RS09455 at 1621.728 kb on + strand, within SGL_RS09455 at 1621.788 kb on - strand, within SGL_RS09455 at 1621.819 kb on + strand at 1621.897 kb on + strand at 1621.939 kb on + strand at 1621.974 kb on + strand at 1621.996 kb on + strand at 1621.996 kb on + strand at 1622.042 kb on + strand at 1622.064 kb on - strand at 1622.089 kb on + strand at 1622.113 kb on + strand, within SGL_RS09460 at 1622.113 kb on + strand, within SGL_RS09460 at 1622.126 kb on - strand, within SGL_RS09460 at 1622.229 kb on - strand, within SGL_RS09460 at 1622.241 kb on - strand, within SGL_RS09460 at 1622.246 kb on - strand, within SGL_RS09460 at 1622.251 kb on + strand, within SGL_RS09460 at 1622.299 kb on - strand, within SGL_RS09460 at 1622.353 kb on + strand, within SGL_RS09460 at 1622.363 kb on - strand, within SGL_RS09460 at 1622.468 kb on + strand, within SGL_RS09460 at 1622.474 kb on - strand, within SGL_RS09460 at 1622.527 kb on + strand, within SGL_RS09460 at 1622.595 kb on - strand, within SGL_RS09460
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M CuSO4 remove 1,621,306 - SGL_RS09455 0.33 -0.7 1,621,338 + SGL_RS09455 0.37 -0.5 1,621,430 - SGL_RS09455 0.48 +0.0 1,621,578 - SGL_RS09455 0.65 -2.2 1,621,647 - SGL_RS09455 0.73 -0.1 1,621,683 + SGL_RS09455 0.77 -0.7 1,621,688 + SGL_RS09455 0.77 +0.4 1,621,696 - SGL_RS09455 0.78 -0.3 1,621,728 + SGL_RS09455 0.82 +0.4 1,621,788 - SGL_RS09455 0.89 -0.3 1,621,819 + -0.3 1,621,897 + +0.1 1,621,939 + -0.3 1,621,974 + -0.1 1,621,996 + -0.7 1,621,996 + +0.5 1,622,042 + -0.2 1,622,064 - -0.7 1,622,089 + -0.3 1,622,113 + SGL_RS09460 0.11 -0.3 1,622,113 + SGL_RS09460 0.11 -0.1 1,622,126 - SGL_RS09460 0.12 +0.3 1,622,229 - SGL_RS09460 0.21 +0.1 1,622,241 - SGL_RS09460 0.23 +0.1 1,622,246 - SGL_RS09460 0.23 +0.6 1,622,251 + SGL_RS09460 0.23 +0.5 1,622,299 - SGL_RS09460 0.28 +0.7 1,622,353 + SGL_RS09460 0.33 +0.3 1,622,363 - SGL_RS09460 0.34 -0.3 1,622,468 + SGL_RS09460 0.43 -0.6 1,622,474 - SGL_RS09460 0.44 -0.0 1,622,527 + SGL_RS09460 0.49 -0.0 1,622,595 - SGL_RS09460 0.55 -0.2
Or see this region's nucleotide sequence