Experiment: growth in full media supplemented with 3 .M CuSO4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS07560 and SGL_RS07565 are separated by 9 nucleotides SGL_RS07565 and SGL_RS19580 are separated by 45 nucleotides SGL_RS19580 and SGL_RS07570 are separated by 234 nucleotides SGL_RS07570 and SGL_RS07575 are separated by 130 nucleotides
SGL_RS07560: SGL_RS07560 - thylakoid lumen protein, at 1,222,610 to 1,222,927
_RS07560
SGL_RS07565: SGL_RS07565 - hypothetical protein, at 1,222,937 to 1,223,209
_RS07565
SGL_RS19580: SGL_RS19580 - hypothetical protein, at 1,223,255 to 1,223,431
_RS19580
SGL_RS07570: SGL_RS07570 - ABC transporter permease, at 1,223,666 to 1,224,646
_RS07570
SGL_RS07575: SGL_RS07575 - D-alanine--D-alanine ligase family protein, at 1,224,777 to 1,225,841
_RS07575
Position (kb)
1223
1224
1225 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1222.679 kb on - strand, within SGL_RS07560 at 1222.774 kb on - strand, within SGL_RS07560 at 1222.853 kb on + strand, within SGL_RS07560 at 1222.863 kb on - strand, within SGL_RS07560 at 1222.885 kb on + strand, within SGL_RS07560 at 1222.986 kb on + strand, within SGL_RS07565 at 1223.023 kb on - strand, within SGL_RS07565 at 1223.040 kb on + strand, within SGL_RS07565 at 1223.048 kb on - strand, within SGL_RS07565 at 1223.114 kb on + strand, within SGL_RS07565 at 1223.122 kb on - strand, within SGL_RS07565 at 1223.122 kb on - strand, within SGL_RS07565 at 1223.132 kb on + strand, within SGL_RS07565 at 1223.158 kb on - strand, within SGL_RS07565 at 1223.243 kb on - strand at 1223.344 kb on + strand, within SGL_RS19580 at 1223.344 kb on + strand, within SGL_RS19580 at 1223.356 kb on - strand, within SGL_RS19580 at 1223.534 kb on - strand at 1223.549 kb on + strand at 1223.609 kb on + strand at 1223.943 kb on + strand, within SGL_RS07570 at 1224.246 kb on + strand, within SGL_RS07570 at 1224.416 kb on - strand, within SGL_RS07570 at 1224.429 kb on + strand, within SGL_RS07570 at 1224.522 kb on + strand, within SGL_RS07570 at 1224.569 kb on + strand at 1224.579 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M CuSO4 remove 1,222,679 - SGL_RS07560 0.22 +1.6 1,222,774 - SGL_RS07560 0.52 -0.7 1,222,853 + SGL_RS07560 0.76 +0.2 1,222,863 - SGL_RS07560 0.80 -0.8 1,222,885 + SGL_RS07560 0.86 -0.5 1,222,986 + SGL_RS07565 0.18 -2.4 1,223,023 - SGL_RS07565 0.32 -2.2 1,223,040 + SGL_RS07565 0.38 -3.7 1,223,048 - SGL_RS07565 0.41 -3.2 1,223,114 + SGL_RS07565 0.65 -2.3 1,223,122 - SGL_RS07565 0.68 -3.9 1,223,122 - SGL_RS07565 0.68 -1.9 1,223,132 + SGL_RS07565 0.71 -2.3 1,223,158 - SGL_RS07565 0.81 -3.5 1,223,243 - -1.6 1,223,344 + SGL_RS19580 0.50 +0.5 1,223,344 + SGL_RS19580 0.50 +0.2 1,223,356 - SGL_RS19580 0.57 +0.1 1,223,534 - -0.8 1,223,549 + +0.1 1,223,609 + +0.1 1,223,943 + SGL_RS07570 0.28 -2.2 1,224,246 + SGL_RS07570 0.59 -2.9 1,224,416 - SGL_RS07570 0.76 -1.9 1,224,429 + SGL_RS07570 0.78 -1.7 1,224,522 + SGL_RS07570 0.87 -1.7 1,224,569 + -2.5 1,224,579 - -2.4
Or see this region's nucleotide sequence