Experiment: growth in full media supplemented with 3 .M CuSO4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS05320 and SGL_RS05325 are separated by 148 nucleotides SGL_RS05325 and SGL_RS05330 are separated by 91 nucleotides SGL_RS05330 and SGL_RS05335 are separated by 77 nucleotides SGL_RS05335 and SGL_RS05340 are separated by 274 nucleotides
SGL_RS05320: SGL_RS05320 - PBP1A family penicillin-binding protein, at 739,682 to 741,931
_RS05320
SGL_RS05325: SGL_RS05325 - PAP/fibrillin family protein, at 742,080 to 742,688
_RS05325
SGL_RS05330: SGL_RS05330 - ABC transporter ATP-binding protein, at 742,780 to 744,732
_RS05330
SGL_RS05335: SGL_RS05335 - hypothetical protein, at 744,810 to 745,064
_RS05335
SGL_RS05340: SGL_RS05340 - MBL fold metallo-hydrolase, at 745,339 to 746,124
_RS05340
Position (kb) 742
743
744
745 Strain fitness (log2 ratio) -2
-1
0
1 at 741.907 kb on - strand at 741.973 kb on - strand at 742.043 kb on - strand at 742.095 kb on + strand at 742.176 kb on - strand, within SGL_RS05325 at 742.217 kb on - strand, within SGL_RS05325 at 742.275 kb on + strand, within SGL_RS05325 at 742.397 kb on + strand, within SGL_RS05325 at 742.405 kb on - strand, within SGL_RS05325 at 742.464 kb on + strand, within SGL_RS05325 at 742.486 kb on + strand, within SGL_RS05325 at 742.554 kb on - strand, within SGL_RS05325 at 742.678 kb on + strand at 743.095 kb on + strand, within SGL_RS05330 at 743.150 kb on + strand, within SGL_RS05330 at 743.151 kb on + strand, within SGL_RS05330 at 743.273 kb on - strand, within SGL_RS05330 at 743.291 kb on - strand, within SGL_RS05330 at 743.680 kb on + strand, within SGL_RS05330 at 743.763 kb on + strand, within SGL_RS05330 at 743.763 kb on + strand, within SGL_RS05330 at 743.763 kb on + strand, within SGL_RS05330 at 743.771 kb on - strand, within SGL_RS05330 at 743.985 kb on + strand, within SGL_RS05330 at 744.053 kb on - strand, within SGL_RS05330 at 744.088 kb on + strand, within SGL_RS05330 at 744.173 kb on - strand, within SGL_RS05330 at 744.338 kb on + strand, within SGL_RS05330 at 744.359 kb on + strand, within SGL_RS05330 at 744.399 kb on - strand, within SGL_RS05330 at 744.400 kb on - strand, within SGL_RS05330 at 744.429 kb on + strand, within SGL_RS05330 at 744.732 kb on + strand at 744.897 kb on + strand, within SGL_RS05335 at 744.910 kb on - strand, within SGL_RS05335 at 744.915 kb on - strand, within SGL_RS05335 at 744.926 kb on - strand, within SGL_RS05335 at 744.945 kb on - strand, within SGL_RS05335 at 744.945 kb on - strand, within SGL_RS05335 at 744.950 kb on - strand, within SGL_RS05335 at 744.991 kb on + strand, within SGL_RS05335 at 745.027 kb on + strand, within SGL_RS05335 at 745.028 kb on - strand, within SGL_RS05335 at 745.034 kb on - strand, within SGL_RS05335 at 745.048 kb on + strand at 745.110 kb on - strand at 745.513 kb on + strand, within SGL_RS05340 at 745.571 kb on + strand, within SGL_RS05340
Per-strain Table
Position Strand Gene LocusTag Fraction growth in full media supplemented with 3 .M CuSO4 remove 741,907 - -2.1 741,973 - -0.2 742,043 - -0.3 742,095 + -0.5 742,176 - SGL_RS05325 0.16 -0.2 742,217 - SGL_RS05325 0.22 +0.0 742,275 + SGL_RS05325 0.32 -0.2 742,397 + SGL_RS05325 0.52 -0.5 742,405 - SGL_RS05325 0.53 -0.7 742,464 + SGL_RS05325 0.63 -0.4 742,486 + SGL_RS05325 0.67 -0.5 742,554 - SGL_RS05325 0.78 -0.5 742,678 + -0.2 743,095 + SGL_RS05330 0.16 -1.5 743,150 + SGL_RS05330 0.19 -2.0 743,151 + SGL_RS05330 0.19 -2.5 743,273 - SGL_RS05330 0.25 -0.5 743,291 - SGL_RS05330 0.26 -1.5 743,680 + SGL_RS05330 0.46 -1.8 743,763 + SGL_RS05330 0.50 -2.2 743,763 + SGL_RS05330 0.50 -1.3 743,763 + SGL_RS05330 0.50 -1.4 743,771 - SGL_RS05330 0.51 -1.6 743,985 + SGL_RS05330 0.62 -1.5 744,053 - SGL_RS05330 0.65 -0.7 744,088 + SGL_RS05330 0.67 -1.3 744,173 - SGL_RS05330 0.71 -1.6 744,338 + SGL_RS05330 0.80 -1.7 744,359 + SGL_RS05330 0.81 -1.6 744,399 - SGL_RS05330 0.83 -1.6 744,400 - SGL_RS05330 0.83 -1.3 744,429 + SGL_RS05330 0.84 -2.6 744,732 + -0.4 744,897 + SGL_RS05335 0.34 +0.4 744,910 - SGL_RS05335 0.39 -0.3 744,915 - SGL_RS05335 0.41 -0.3 744,926 - SGL_RS05335 0.45 +0.3 744,945 - SGL_RS05335 0.53 +1.0 744,945 - SGL_RS05335 0.53 +0.1 744,950 - SGL_RS05335 0.55 +0.1 744,991 + SGL_RS05335 0.71 +0.0 745,027 + SGL_RS05335 0.85 +0.7 745,028 - SGL_RS05335 0.85 -0.2 745,034 - SGL_RS05335 0.88 +0.1 745,048 + +0.2 745,110 - +0.3 745,513 + SGL_RS05340 0.22 -0.1 745,571 + SGL_RS05340 0.30 +0.5
Or see this region's nucleotide sequence