Experiment: Arg 10 mM as N source, buffered with TES 20 mM TES pH8 but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS17760 and SGL_RS17765 are separated by 93 nucleotides SGL_RS17765 and SGL_RS17775 are separated by 816 nucleotides
SGL_RS17760: SGL_RS17760 - circadian clock protein KaiC, at 3,434,876 to 3,436,435
_RS17760
SGL_RS17765: SGL_RS17765 - DUF4114 domain-containing protein, at 3,436,529 to 3,441,844
_RS17765
SGL_RS17775: SGL_RS17775 - hypothetical protein, at 3,442,661 to 3,443,287
_RS17775
Position (kb)
3436
3437
3438
3439
3440
3441
3442 Strain fitness (log2 ratio)
-2
-1
0
1 at 3435.558 kb on + strand, within SGL_RS17760 at 3435.641 kb on + strand, within SGL_RS17760 at 3435.641 kb on + strand, within SGL_RS17760 at 3435.641 kb on + strand, within SGL_RS17760 at 3435.649 kb on - strand, within SGL_RS17760 at 3435.649 kb on - strand, within SGL_RS17760 at 3435.755 kb on + strand, within SGL_RS17760 at 3436.027 kb on + strand, within SGL_RS17760 at 3436.029 kb on + strand, within SGL_RS17760 at 3436.290 kb on + strand at 3436.420 kb on - strand at 3436.420 kb on - strand at 3436.504 kb on - strand at 3436.600 kb on + strand at 3436.606 kb on - strand at 3436.615 kb on + strand at 3436.621 kb on + strand at 3436.629 kb on - strand at 3436.658 kb on + strand at 3436.688 kb on - strand at 3436.699 kb on - strand at 3436.773 kb on + strand at 3436.773 kb on + strand at 3436.781 kb on - strand at 3436.827 kb on - strand at 3436.853 kb on + strand at 3437.144 kb on - strand, within SGL_RS17765 at 3437.162 kb on - strand, within SGL_RS17765 at 3437.212 kb on + strand, within SGL_RS17765 at 3437.212 kb on + strand, within SGL_RS17765 at 3437.346 kb on + strand, within SGL_RS17765 at 3437.508 kb on + strand, within SGL_RS17765 at 3437.589 kb on - strand, within SGL_RS17765 at 3437.614 kb on + strand, within SGL_RS17765 at 3437.646 kb on - strand, within SGL_RS17765 at 3437.648 kb on + strand, within SGL_RS17765 at 3437.674 kb on - strand, within SGL_RS17765 at 3437.894 kb on + strand, within SGL_RS17765 at 3437.902 kb on - strand, within SGL_RS17765 at 3438.077 kb on + strand, within SGL_RS17765 at 3438.141 kb on + strand, within SGL_RS17765 at 3438.213 kb on - strand, within SGL_RS17765 at 3438.358 kb on + strand, within SGL_RS17765 at 3438.380 kb on + strand, within SGL_RS17765 at 3438.449 kb on - strand, within SGL_RS17765 at 3438.488 kb on + strand, within SGL_RS17765 at 3438.521 kb on + strand, within SGL_RS17765 at 3438.550 kb on + strand, within SGL_RS17765 at 3438.550 kb on + strand, within SGL_RS17765 at 3438.583 kb on + strand, within SGL_RS17765 at 3438.591 kb on - strand, within SGL_RS17765 at 3438.591 kb on - strand, within SGL_RS17765 at 3438.591 kb on - strand, within SGL_RS17765 at 3438.695 kb on - strand, within SGL_RS17765 at 3438.697 kb on + strand, within SGL_RS17765 at 3438.705 kb on - strand, within SGL_RS17765 at 3438.835 kb on + strand, within SGL_RS17765 at 3438.843 kb on - strand, within SGL_RS17765 at 3438.843 kb on - strand, within SGL_RS17765 at 3438.925 kb on - strand, within SGL_RS17765 at 3438.960 kb on - strand, within SGL_RS17765 at 3439.063 kb on - strand, within SGL_RS17765 at 3439.201 kb on + strand, within SGL_RS17765 at 3439.278 kb on - strand, within SGL_RS17765 at 3439.312 kb on - strand, within SGL_RS17765 at 3439.322 kb on + strand, within SGL_RS17765 at 3439.322 kb on + strand, within SGL_RS17765 at 3439.330 kb on - strand, within SGL_RS17765 at 3439.371 kb on + strand, within SGL_RS17765 at 3439.510 kb on + strand, within SGL_RS17765 at 3439.545 kb on + strand, within SGL_RS17765 at 3439.553 kb on + strand, within SGL_RS17765 at 3439.725 kb on + strand, within SGL_RS17765 at 3439.760 kb on - strand, within SGL_RS17765 at 3439.836 kb on - strand, within SGL_RS17765 at 3439.845 kb on - strand, within SGL_RS17765 at 3439.938 kb on - strand, within SGL_RS17765 at 3440.003 kb on + strand, within SGL_RS17765 at 3440.150 kb on + strand, within SGL_RS17765 at 3440.204 kb on + strand, within SGL_RS17765 at 3440.217 kb on - strand, within SGL_RS17765 at 3440.234 kb on - strand, within SGL_RS17765 at 3440.279 kb on + strand, within SGL_RS17765 at 3440.350 kb on + strand, within SGL_RS17765 at 3440.352 kb on - strand, within SGL_RS17765 at 3440.359 kb on - strand, within SGL_RS17765 at 3440.447 kb on - strand, within SGL_RS17765 at 3440.526 kb on - strand, within SGL_RS17765 at 3440.526 kb on - strand, within SGL_RS17765 at 3440.576 kb on - strand, within SGL_RS17765 at 3440.596 kb on + strand, within SGL_RS17765 at 3440.644 kb on + strand, within SGL_RS17765 at 3440.644 kb on + strand, within SGL_RS17765 at 3440.644 kb on + strand, within SGL_RS17765 at 3440.884 kb on + strand, within SGL_RS17765 at 3441.082 kb on - strand, within SGL_RS17765 at 3441.403 kb on - strand at 3442.563 kb on - strand at 3442.613 kb on - strand at 3442.615 kb on + strand at 3442.834 kb on - strand, within SGL_RS17775
Per-strain Table
Position Strand Gene LocusTag Fraction Arg 10 mM as N source, buffered with TES 20 mM TES pH8 but diluted to prevent light attenuation remove 3,435,558 + SGL_RS17760 0.44 -0.9 3,435,641 + SGL_RS17760 0.49 +0.4 3,435,641 + SGL_RS17760 0.49 -1.3 3,435,641 + SGL_RS17760 0.49 -1.7 3,435,649 - SGL_RS17760 0.50 -1.6 3,435,649 - SGL_RS17760 0.50 -1.0 3,435,755 + SGL_RS17760 0.56 -1.4 3,436,027 + SGL_RS17760 0.74 -0.9 3,436,029 + SGL_RS17760 0.74 -2.2 3,436,290 + -1.5 3,436,420 - -1.5 3,436,420 - -1.7 3,436,504 - +0.2 3,436,600 + +0.0 3,436,606 - +0.2 3,436,615 + +0.4 3,436,621 + -0.0 3,436,629 - +0.1 3,436,658 + +0.8 3,436,688 - -0.2 3,436,699 - -0.3 3,436,773 + -0.3 3,436,773 + -0.7 3,436,781 - +0.1 3,436,827 - +0.1 3,436,853 + -0.4 3,437,144 - SGL_RS17765 0.12 +0.1 3,437,162 - SGL_RS17765 0.12 -0.4 3,437,212 + SGL_RS17765 0.13 +0.1 3,437,212 + SGL_RS17765 0.13 -0.3 3,437,346 + SGL_RS17765 0.15 -0.1 3,437,508 + SGL_RS17765 0.18 -0.1 3,437,589 - SGL_RS17765 0.20 -0.5 3,437,614 + SGL_RS17765 0.20 -0.3 3,437,646 - SGL_RS17765 0.21 -0.0 3,437,648 + SGL_RS17765 0.21 -0.3 3,437,674 - SGL_RS17765 0.22 -0.6 3,437,894 + SGL_RS17765 0.26 -0.3 3,437,902 - SGL_RS17765 0.26 -0.2 3,438,077 + SGL_RS17765 0.29 -0.4 3,438,141 + SGL_RS17765 0.30 +0.3 3,438,213 - SGL_RS17765 0.32 +0.2 3,438,358 + SGL_RS17765 0.34 +0.1 3,438,380 + SGL_RS17765 0.35 +0.1 3,438,449 - SGL_RS17765 0.36 +0.2 3,438,488 + SGL_RS17765 0.37 -1.4 3,438,521 + SGL_RS17765 0.37 -0.1 3,438,550 + SGL_RS17765 0.38 -0.1 3,438,550 + SGL_RS17765 0.38 +0.1 3,438,583 + SGL_RS17765 0.39 -0.0 3,438,591 - SGL_RS17765 0.39 -0.6 3,438,591 - SGL_RS17765 0.39 +0.0 3,438,591 - SGL_RS17765 0.39 -0.7 3,438,695 - SGL_RS17765 0.41 -0.1 3,438,697 + SGL_RS17765 0.41 -0.1 3,438,705 - SGL_RS17765 0.41 +0.4 3,438,835 + SGL_RS17765 0.43 +0.6 3,438,843 - SGL_RS17765 0.44 -0.1 3,438,843 - SGL_RS17765 0.44 -0.4 3,438,925 - SGL_RS17765 0.45 -0.1 3,438,960 - SGL_RS17765 0.46 +0.1 3,439,063 - SGL_RS17765 0.48 -0.6 3,439,201 + SGL_RS17765 0.50 -0.3 3,439,278 - SGL_RS17765 0.52 -0.5 3,439,312 - SGL_RS17765 0.52 -0.5 3,439,322 + SGL_RS17765 0.53 -0.4 3,439,322 + SGL_RS17765 0.53 -0.2 3,439,330 - SGL_RS17765 0.53 -0.5 3,439,371 + SGL_RS17765 0.53 -0.4 3,439,510 + SGL_RS17765 0.56 -1.4 3,439,545 + SGL_RS17765 0.57 +0.3 3,439,553 + SGL_RS17765 0.57 +0.5 3,439,725 + SGL_RS17765 0.60 +0.4 3,439,760 - SGL_RS17765 0.61 -0.2 3,439,836 - SGL_RS17765 0.62 +0.3 3,439,845 - SGL_RS17765 0.62 -0.8 3,439,938 - SGL_RS17765 0.64 +0.2 3,440,003 + SGL_RS17765 0.65 -0.5 3,440,150 + SGL_RS17765 0.68 +0.2 3,440,204 + SGL_RS17765 0.69 +0.2 3,440,217 - SGL_RS17765 0.69 +0.3 3,440,234 - SGL_RS17765 0.70 -0.3 3,440,279 + SGL_RS17765 0.71 -0.4 3,440,350 + SGL_RS17765 0.72 -0.3 3,440,352 - SGL_RS17765 0.72 -0.2 3,440,359 - SGL_RS17765 0.72 +0.2 3,440,447 - SGL_RS17765 0.74 +0.2 3,440,526 - SGL_RS17765 0.75 +0.2 3,440,526 - SGL_RS17765 0.75 -0.1 3,440,576 - SGL_RS17765 0.76 -0.0 3,440,596 + SGL_RS17765 0.77 -2.6 3,440,644 + SGL_RS17765 0.77 -0.3 3,440,644 + SGL_RS17765 0.77 +0.1 3,440,644 + SGL_RS17765 0.77 -0.1 3,440,884 + SGL_RS17765 0.82 -0.1 3,441,082 - SGL_RS17765 0.86 -0.6 3,441,403 - -0.2 3,442,563 - -0.8 3,442,613 - -0.1 3,442,615 + -0.0 3,442,834 - SGL_RS17775 0.28 -0.2
Or see this region's nucleotide sequence