Experiment: Arg 10 mM as N source, buffered with TES 20 mM TES pH8 but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS15770 and SGL_RS15775 are separated by 197 nucleotides SGL_RS15775 and SGL_RS15780 are separated by 14 nucleotides
SGL_RS15770: SGL_RS15770 - CIA30 family protein, at 2,987,263 to 2,988,609
_RS15770
SGL_RS15775: SGL_RS15775 - AarF/ABC1/UbiB kinase family protein, at 2,988,807 to 2,990,510
_RS15775
SGL_RS15780: SGL_RS15780 - HAMP domain-containing sensor histidine kinase, at 2,990,525 to 2,991,898
_RS15780
Position (kb)
2988
2989
2990
2991 Strain fitness (log2 ratio)
-2
-1
0
1 at 2987.857 kb on + strand, within SGL_RS15770 at 2988.004 kb on - strand, within SGL_RS15770 at 2988.122 kb on - strand, within SGL_RS15770 at 2988.128 kb on + strand, within SGL_RS15770 at 2988.134 kb on - strand, within SGL_RS15770 at 2988.232 kb on - strand, within SGL_RS15770 at 2988.387 kb on + strand, within SGL_RS15770 at 2988.419 kb on - strand, within SGL_RS15770 at 2988.481 kb on - strand at 2988.508 kb on + strand at 2988.534 kb on - strand at 2989.034 kb on + strand, within SGL_RS15775 at 2989.252 kb on - strand, within SGL_RS15775 at 2989.259 kb on - strand, within SGL_RS15775 at 2989.259 kb on - strand, within SGL_RS15775 at 2989.346 kb on - strand, within SGL_RS15775 at 2989.370 kb on - strand, within SGL_RS15775 at 2989.463 kb on - strand, within SGL_RS15775 at 2989.819 kb on - strand, within SGL_RS15775 at 2990.068 kb on - strand, within SGL_RS15775 at 2990.093 kb on + strand, within SGL_RS15775 at 2990.093 kb on + strand, within SGL_RS15775 at 2990.117 kb on - strand, within SGL_RS15775 at 2990.222 kb on - strand, within SGL_RS15775 at 2990.313 kb on + strand, within SGL_RS15775 at 2990.339 kb on + strand, within SGL_RS15775 at 2990.352 kb on + strand at 2990.360 kb on - strand at 2990.462 kb on - strand at 2990.578 kb on + strand at 2990.619 kb on + strand at 2990.815 kb on + strand, within SGL_RS15780 at 2990.823 kb on - strand, within SGL_RS15780 at 2990.944 kb on + strand, within SGL_RS15780 at 2991.156 kb on - strand, within SGL_RS15780
Per-strain Table
Position Strand Gene LocusTag Fraction Arg 10 mM as N source, buffered with TES 20 mM TES pH8 but diluted to prevent light attenuation remove 2,987,857 + SGL_RS15770 0.44 -1.0 2,988,004 - SGL_RS15770 0.55 -0.6 2,988,122 - SGL_RS15770 0.64 -0.3 2,988,128 + SGL_RS15770 0.64 -0.4 2,988,134 - SGL_RS15770 0.65 -0.2 2,988,232 - SGL_RS15770 0.72 -0.2 2,988,387 + SGL_RS15770 0.83 -0.4 2,988,419 - SGL_RS15770 0.86 +0.1 2,988,481 - +0.3 2,988,508 + +0.2 2,988,534 - +0.1 2,989,034 + SGL_RS15775 0.13 -0.6 2,989,252 - SGL_RS15775 0.26 -0.6 2,989,259 - SGL_RS15775 0.27 -1.9 2,989,259 - SGL_RS15775 0.27 -1.2 2,989,346 - SGL_RS15775 0.32 -0.8 2,989,370 - SGL_RS15775 0.33 -0.8 2,989,463 - SGL_RS15775 0.38 -1.4 2,989,819 - SGL_RS15775 0.59 -1.3 2,990,068 - SGL_RS15775 0.74 -0.3 2,990,093 + SGL_RS15775 0.75 -2.0 2,990,093 + SGL_RS15775 0.75 -0.8 2,990,117 - SGL_RS15775 0.77 -1.0 2,990,222 - SGL_RS15775 0.83 -1.2 2,990,313 + SGL_RS15775 0.88 -1.1 2,990,339 + SGL_RS15775 0.90 -0.6 2,990,352 + -1.8 2,990,360 - -2.1 2,990,462 - -0.9 2,990,578 + -1.1 2,990,619 + +0.6 2,990,815 + SGL_RS15780 0.21 -0.2 2,990,823 - SGL_RS15780 0.22 -0.1 2,990,944 + SGL_RS15780 0.30 -0.7 2,991,156 - SGL_RS15780 0.46 +1.6
Or see this region's nucleotide sequence