Experiment: Arg 10 mM as N source, buffered with TES 20 mM TES pH8 but diluted to prevent light attenuation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS01935 and SGL_RS01940 are separated by 261 nucleotides SGL_RS01940 and SGL_RS01945 overlap by 4 nucleotides
SGL_RS01935: SGL_RS01935 - iron ABC transporter permease, at 14,626 to 15,675
_RS01935
SGL_RS01940: SGL_RS01940 - ABC transporter ATP-binding protein, at 15,937 to 16,743
_RS01940
SGL_RS01945: SGL_RS01945 - iron-siderophore ABC transporter substrate-binding protein, at 16,740 to 17,687
_RS01945
Position (kb) 15
16
17 Strain fitness (log2 ratio) -1
0
1 at 15.058 kb on + strand, within SGL_RS01935 at 15.067 kb on - strand, within SGL_RS01935 at 15.156 kb on - strand, within SGL_RS01935 at 15.156 kb on - strand, within SGL_RS01935 at 15.273 kb on + strand, within SGL_RS01935 at 15.315 kb on - strand, within SGL_RS01935 at 15.327 kb on - strand, within SGL_RS01935 at 15.329 kb on + strand, within SGL_RS01935 at 15.329 kb on + strand, within SGL_RS01935 at 15.329 kb on + strand, within SGL_RS01935 at 15.337 kb on - strand, within SGL_RS01935 at 15.337 kb on - strand, within SGL_RS01935 at 15.337 kb on - strand, within SGL_RS01935 at 15.337 kb on - strand, within SGL_RS01935 at 15.337 kb on - strand, within SGL_RS01935 at 15.337 kb on - strand, within SGL_RS01935 at 15.420 kb on - strand, within SGL_RS01935 at 15.478 kb on - strand, within SGL_RS01935 at 15.553 kb on - strand, within SGL_RS01935 at 15.677 kb on + strand at 15.712 kb on + strand at 15.722 kb on + strand at 15.730 kb on - strand at 15.730 kb on - strand at 15.857 kb on - strand at 15.892 kb on - strand at 16.095 kb on - strand, within SGL_RS01940 at 16.125 kb on - strand, within SGL_RS01940 at 16.226 kb on + strand, within SGL_RS01940 at 16.226 kb on + strand, within SGL_RS01940 at 16.249 kb on + strand, within SGL_RS01940 at 16.363 kb on + strand, within SGL_RS01940 at 16.368 kb on - strand, within SGL_RS01940 at 16.370 kb on + strand, within SGL_RS01940 at 16.405 kb on + strand, within SGL_RS01940 at 16.411 kb on + strand, within SGL_RS01940 at 16.419 kb on - strand, within SGL_RS01940 at 16.450 kb on + strand, within SGL_RS01940 at 16.540 kb on - strand, within SGL_RS01940 at 16.574 kb on - strand, within SGL_RS01940 at 16.715 kb on + strand at 16.721 kb on - strand at 16.742 kb on - strand at 16.797 kb on - strand at 16.811 kb on + strand at 16.855 kb on + strand, within SGL_RS01945 at 16.932 kb on + strand, within SGL_RS01945 at 16.969 kb on - strand, within SGL_RS01945 at 16.979 kb on - strand, within SGL_RS01945 at 17.054 kb on + strand, within SGL_RS01945 at 17.222 kb on - strand, within SGL_RS01945 at 17.318 kb on + strand, within SGL_RS01945 at 17.421 kb on - strand, within SGL_RS01945 at 17.470 kb on + strand, within SGL_RS01945 at 17.488 kb on - strand, within SGL_RS01945 at 17.502 kb on - strand, within SGL_RS01945 at 17.586 kb on + strand, within SGL_RS01945 at 17.591 kb on + strand, within SGL_RS01945 at 17.599 kb on - strand at 17.613 kb on + strand at 17.710 kb on - strand at 17.723 kb on - strand at 17.723 kb on - strand at 17.736 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Arg 10 mM as N source, buffered with TES 20 mM TES pH8 but diluted to prevent light attenuation remove 15,058 + SGL_RS01935 0.41 +0.6 15,067 - SGL_RS01935 0.42 -0.2 15,156 - SGL_RS01935 0.50 +0.0 15,156 - SGL_RS01935 0.50 +0.0 15,273 + SGL_RS01935 0.62 -0.3 15,315 - SGL_RS01935 0.66 +0.2 15,327 - SGL_RS01935 0.67 +0.1 15,329 + SGL_RS01935 0.67 -0.6 15,329 + SGL_RS01935 0.67 +0.5 15,329 + SGL_RS01935 0.67 +0.3 15,337 - SGL_RS01935 0.68 -0.5 15,337 - SGL_RS01935 0.68 -0.1 15,337 - SGL_RS01935 0.68 -0.3 15,337 - SGL_RS01935 0.68 -0.1 15,337 - SGL_RS01935 0.68 +0.5 15,337 - SGL_RS01935 0.68 -0.1 15,420 - SGL_RS01935 0.76 +0.0 15,478 - SGL_RS01935 0.81 +0.3 15,553 - SGL_RS01935 0.88 +0.1 15,677 + -0.6 15,712 + -0.2 15,722 + -0.3 15,730 - -0.2 15,730 - -0.2 15,857 - -0.3 15,892 - -0.2 16,095 - SGL_RS01940 0.20 +0.9 16,125 - SGL_RS01940 0.23 +0.0 16,226 + SGL_RS01940 0.36 +0.3 16,226 + SGL_RS01940 0.36 -0.0 16,249 + SGL_RS01940 0.39 -0.3 16,363 + SGL_RS01940 0.53 -0.0 16,368 - SGL_RS01940 0.53 +0.1 16,370 + SGL_RS01940 0.54 +0.3 16,405 + SGL_RS01940 0.58 -0.0 16,411 + SGL_RS01940 0.59 -0.1 16,419 - SGL_RS01940 0.60 +0.5 16,450 + SGL_RS01940 0.64 +0.3 16,540 - SGL_RS01940 0.75 +0.9 16,574 - SGL_RS01940 0.79 -0.3 16,715 + -0.0 16,721 - -0.3 16,742 - +0.2 16,797 - -0.6 16,811 + +0.3 16,855 + SGL_RS01945 0.12 -0.5 16,932 + SGL_RS01945 0.20 -1.6 16,969 - SGL_RS01945 0.24 +0.2 16,979 - SGL_RS01945 0.25 +0.0 17,054 + SGL_RS01945 0.33 -0.4 17,222 - SGL_RS01945 0.51 +0.1 17,318 + SGL_RS01945 0.61 +0.2 17,421 - SGL_RS01945 0.72 +0.6 17,470 + SGL_RS01945 0.77 -0.3 17,488 - SGL_RS01945 0.79 +0.1 17,502 - SGL_RS01945 0.80 +0.2 17,586 + SGL_RS01945 0.89 -0.5 17,591 + SGL_RS01945 0.90 -0.1 17,599 - +0.2 17,613 + +0.1 17,710 - +0.7 17,723 - +0.5 17,723 - -0.5 17,736 - +0.1
Or see this region's nucleotide sequence