Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS18930

Experiment: Arg 10 mM as N source, buffered with 20 mM TES pH8

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS11700 and SGL_RS11705 are separated by 226 nucleotidesSGL_RS11705 and SGL_RS18930 are separated by 111 nucleotidesSGL_RS18930 and SGL_RS11715 are separated by 161 nucleotidesSGL_RS11715 and SGL_RS11720 are separated by 4 nucleotidesSGL_RS11720 and SGL_RS11725 are separated by 27 nucleotides SGL_RS11700: SGL_RS11700 - 2OG-Fe(II) oxygenase, at 2,082,864 to 2,083,916 _RS11700 SGL_RS11705: SGL_RS11705 - DUF2281 domain-containing protein, at 2,084,143 to 2,084,370 _RS11705 SGL_RS18930: SGL_RS18930 - PIN domain-containing protein, at 2,084,482 to 2,084,760 _RS18930 SGL_RS11715: SGL_RS11715 - BrnT family toxin, at 2,084,922 to 2,085,206 _RS11715 SGL_RS11720: SGL_RS11720 - hypothetical protein, at 2,085,211 to 2,085,417 _RS11720 SGL_RS11725: SGL_RS11725 - hypothetical protein, at 2,085,445 to 2,085,684 _RS11725 Position (kb) 2084 2085Strain fitness (log2 ratio) -1 0 1at 2083.934 kb on + strandat 2084.038 kb on + strandat 2084.070 kb on + strandat 2084.073 kb on - strandat 2084.719 kb on + strand, within SGL_RS18930at 2085.458 kb on + strandat 2085.581 kb on + strand, within SGL_RS11725at 2085.715 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Arg 10 mM as N source, buffered with 20 mM TES pH8
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2,083,934 + -0.7
2,084,038 + -0.3
2,084,070 + +0.1
2,084,073 - +0.0
2,084,719 + SGL_RS18930 0.85 -1.1
2,085,458 + -0.1
2,085,581 + SGL_RS11725 0.57 -0.4
2,085,715 - -0.0

Or see this region's nucleotide sequence