Experiment: Arg 10 mM as N source, buffered with 20 mM TES pH8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SGL_RS09650 and SGL_RS09655 are separated by 148 nucleotides SGL_RS09655 and SGL_RS09660 are separated by 370 nucleotides SGL_RS09660 and SGL_RS09665 are separated by 185 nucleotides
SGL_RS09650: SGL_RS09650 - hypothetical protein, at 1,654,943 to 1,655,140
_RS09650
SGL_RS09655: SGL_RS09655 - heterocyst frequency control protein PatD, at 1,655,289 to 1,655,672
_RS09655
SGL_RS09660: SGL_RS09660 - RelA/SpoT family protein, at 1,656,043 to 1,658,325
_RS09660
SGL_RS09665: SGL_RS09665 - adenosylhomocysteinase, at 1,658,511 to 1,659,788
_RS09665
Position (kb)
1656
1657
1658
1659 Strain fitness (log2 ratio)
-2
-1
0
1 at 1655.063 kb on + strand, within SGL_RS09650 at 1655.105 kb on + strand, within SGL_RS09650 at 1655.165 kb on + strand at 1655.195 kb on - strand at 1655.205 kb on - strand at 1655.286 kb on + strand at 1655.294 kb on - strand at 1655.310 kb on + strand at 1655.320 kb on + strand at 1655.376 kb on - strand, within SGL_RS09655 at 1655.412 kb on + strand, within SGL_RS09655 at 1655.432 kb on + strand, within SGL_RS09655 at 1655.506 kb on - strand, within SGL_RS09655 at 1655.629 kb on + strand, within SGL_RS09655 at 1655.701 kb on - strand at 1655.751 kb on + strand at 1655.764 kb on - strand at 1655.802 kb on + strand at 1655.929 kb on + strand at 1656.021 kb on + strand at 1656.097 kb on - strand at 1656.099 kb on - strand at 1657.197 kb on - strand, within SGL_RS09660 at 1657.393 kb on + strand, within SGL_RS09660 at 1657.412 kb on - strand, within SGL_RS09660 at 1657.430 kb on + strand, within SGL_RS09660 at 1657.430 kb on - strand, within SGL_RS09660 at 1657.507 kb on + strand, within SGL_RS09660 at 1657.523 kb on + strand, within SGL_RS09660 at 1657.531 kb on + strand, within SGL_RS09660 at 1657.629 kb on + strand, within SGL_RS09660 at 1657.656 kb on - strand, within SGL_RS09660 at 1657.666 kb on - strand, within SGL_RS09660 at 1657.731 kb on - strand, within SGL_RS09660 at 1657.764 kb on - strand, within SGL_RS09660 at 1657.850 kb on + strand, within SGL_RS09660 at 1657.971 kb on - strand, within SGL_RS09660 at 1657.976 kb on - strand, within SGL_RS09660 at 1658.009 kb on + strand, within SGL_RS09660 at 1658.173 kb on - strand at 1658.254 kb on + strand at 1658.323 kb on - strand at 1658.423 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Arg 10 mM as N source, buffered with 20 mM TES pH8 remove 1,655,063 + SGL_RS09650 0.61 +0.1 1,655,105 + SGL_RS09650 0.82 +0.6 1,655,165 + -0.0 1,655,195 - +0.1 1,655,205 - -0.3 1,655,286 + -0.2 1,655,294 - +0.1 1,655,310 + +0.2 1,655,320 + +0.1 1,655,376 - SGL_RS09655 0.23 -0.1 1,655,412 + SGL_RS09655 0.32 +0.1 1,655,432 + SGL_RS09655 0.37 +0.3 1,655,506 - SGL_RS09655 0.57 +0.1 1,655,629 + SGL_RS09655 0.89 -0.3 1,655,701 - -0.2 1,655,751 + -0.1 1,655,764 - -0.6 1,655,802 + -2.1 1,655,929 + -0.9 1,656,021 + -0.9 1,656,097 - -0.3 1,656,099 - -0.0 1,657,197 - SGL_RS09660 0.51 +0.3 1,657,393 + SGL_RS09660 0.59 -1.7 1,657,412 - SGL_RS09660 0.60 -1.1 1,657,430 + SGL_RS09660 0.61 -1.2 1,657,430 - SGL_RS09660 0.61 -1.7 1,657,507 + SGL_RS09660 0.64 -1.5 1,657,523 + SGL_RS09660 0.65 -1.6 1,657,531 + SGL_RS09660 0.65 -0.1 1,657,629 + SGL_RS09660 0.69 -1.0 1,657,656 - SGL_RS09660 0.71 -2.1 1,657,666 - SGL_RS09660 0.71 +0.7 1,657,731 - SGL_RS09660 0.74 -2.4 1,657,764 - SGL_RS09660 0.75 -0.6 1,657,850 + SGL_RS09660 0.79 -1.0 1,657,971 - SGL_RS09660 0.84 -1.1 1,657,976 - SGL_RS09660 0.85 -1.5 1,658,009 + SGL_RS09660 0.86 -1.4 1,658,173 - -2.5 1,658,254 + +0.3 1,658,323 - +0.9 1,658,423 + +0.2
Or see this region's nucleotide sequence