Strain Fitness in Synechocystis sp000284455 PCC 6803 around SGL_RS06370

Experiment: Arg 10 mM as N source, buffered with 20 mM TES pH8

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSGL_RS06365 and SGL_RS06370 are separated by 126 nucleotidesSGL_RS06370 and SGL_RS06375 are separated by 106 nucleotides SGL_RS06365: SGL_RS06365 - iron uptake porin, at 958,137 to 960,029 _RS06365 SGL_RS06370: SGL_RS06370 - cysteine synthase A, at 960,156 to 961,094 _RS06370 SGL_RS06375: SGL_RS06375 - glucose-6-phosphate dehydrogenase, at 961,201 to 962,730 _RS06375 Position (kb) 960 961 962Strain fitness (log2 ratio) -3 -2 -1 0 1at 960.518 kb on + strand, within SGL_RS06370at 960.632 kb on + strand, within SGL_RS06370at 960.640 kb on - strand, within SGL_RS06370at 960.774 kb on - strand, within SGL_RS06370at 960.829 kb on + strand, within SGL_RS06370at 960.829 kb on + strand, within SGL_RS06370at 961.061 kb on + strandat 961.229 kb on + strandat 961.229 kb on + strandat 961.253 kb on + strandat 961.253 kb on + strandat 961.261 kb on - strandat 961.492 kb on + strand, within SGL_RS06375at 961.734 kb on - strand, within SGL_RS06375at 961.795 kb on - strand, within SGL_RS06375at 961.858 kb on + strand, within SGL_RS06375at 961.913 kb on + strand, within SGL_RS06375at 961.913 kb on + strand, within SGL_RS06375at 961.966 kb on + strand, within SGL_RS06375at 962.010 kb on - strand, within SGL_RS06375

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Per-strain Table

Position Strand Gene LocusTag Fraction Arg 10 mM as N source, buffered with 20 mM TES pH8
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960,518 + SGL_RS06370 0.39 -1.9
960,632 + SGL_RS06370 0.51 -2.6
960,640 - SGL_RS06370 0.52 -1.1
960,774 - SGL_RS06370 0.66 -2.5
960,829 + SGL_RS06370 0.72 -1.2
960,829 + SGL_RS06370 0.72 -2.8
961,061 + +0.4
961,229 + +0.1
961,229 + +0.2
961,253 + +0.1
961,253 + +0.0
961,261 - -0.3
961,492 + SGL_RS06375 0.19 -0.2
961,734 - SGL_RS06375 0.35 -0.4
961,795 - SGL_RS06375 0.39 +0.6
961,858 + SGL_RS06375 0.43 -0.2
961,913 + SGL_RS06375 0.47 -0.1
961,913 + SGL_RS06375 0.47 +0.1
961,966 + SGL_RS06375 0.50 +0.2
962,010 - SGL_RS06375 0.53 -0.1

Or see this region's nucleotide sequence